Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
SHMTPIIHLKGDRNSLKCLRYRLRKHSDHYRDISSTWHWTGAGNEKTGILTVTYHSETQR
TKFLNTVAIPDSVQILVGYMTM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1f9f-a2-m1-cD 82 82 1.0000 1.0000 1.0000 4.60e-58 1f9f-a2-m1-cC_1f9f-a2-m1-cD
2 1f9f-a2-m1-cC 76 82 0.9268 1.0000 0.9268 2.77e-50 1f9f-a2-m1-cC_1f9f-a2-m1-cD
3 1a7g-a1-m2-cE 82 80 0.5854 0.5854 0.6000 2.22e-29 1a7g-a1-m1-cE_1a7g-a1-m2-cE
4 1a7g-a1-m1-cE 82 80 0.5854 0.5854 0.6000 2.22e-29 1a7g-a1-m1-cE_1a7g-a1-m2-cE
5 2q79-a1-m2-cA 74 78 0.5122 0.5676 0.5385 1.86e-26 2q79-a1-m1-cA_2q79-a1-m2-cA
6 2q79-a1-m1-cA 74 78 0.5122 0.5676 0.5385 1.86e-26 2q79-a1-m1-cA_2q79-a1-m2-cA
7 1r8h-a7-m1-cD 87 84 0.5122 0.4828 0.5000 1.24e-23 1r8h-a7-m1-cC_1r8h-a7-m1-cD
8 1r8h-a4-m1-cE 87 84 0.5122 0.4828 0.5000 1.24e-23 1r8h-a4-m1-cB_1r8h-a4-m1-cE
9 1r8h-a4-m1-cB 87 84 0.5122 0.4828 0.5000 1.24e-23 1r8h-a4-m1-cB_1r8h-a4-m1-cE
10 1r8h-a7-m1-cC 83 83 0.5122 0.5060 0.5060 1.68e-23 1r8h-a7-m1-cC_1r8h-a7-m1-cD
11 6bus-a1-m1-c2 92 71 0.2683 0.2391 0.3099 4.68e-07 6bus-a1-m1-c1_6bus-a1-m1-c2
12 6bus-a1-m1-c1 92 71 0.2683 0.2391 0.3099 4.68e-07 6bus-a1-m1-c1_6bus-a1-m1-c2
13 1jjh-a2-m3-cB 78 68 0.2439 0.2564 0.2941 4.03e-06 1jjh-a2-m1-cB_1jjh-a2-m3-cB
14 1jjh-a2-m1-cB 78 68 0.2439 0.2564 0.2941 4.03e-06 1jjh-a2-m1-cB_1jjh-a2-m3-cB
15 1jjh-a1-m2-cA 77 68 0.2561 0.2727 0.3088 4.54e-06 1jjh-a1-m1-cA_1jjh-a1-m2-cA
16 1jjh-a1-m1-cA 77 68 0.2561 0.2727 0.3088 4.54e-06 1jjh-a1-m1-cA_1jjh-a1-m2-cA
17 1jjh-a3-m3-cC 73 68 0.2439 0.2740 0.2941 1.42e-05 1jjh-a3-m1-cC_1jjh-a3-m3-cC
18 1jjh-a3-m1-cC 73 68 0.2439 0.2740 0.2941 1.42e-05 1jjh-a3-m1-cC_1jjh-a3-m3-cC
19 5bwj-a2-m1-cD 203 40 0.1585 0.0640 0.3250 4.8 5bwj-a2-m1-cC_5bwj-a2-m1-cD
20 7rtn-a1-m1-cC 270 38 0.1707 0.0519 0.3684 5.8 7rtn-a1-m1-cA_7rtn-a1-m1-cC
21 7rtn-a1-m1-cA 270 38 0.1707 0.0519 0.3684 5.8 7rtn-a1-m1-cA_7rtn-a1-m1-cC
22 6tml-a1-m1-cd9 254 16 0.0854 0.0276 0.4375 5.9 6tml-a1-m1-cD9_6tml-a1-m1-cd9
23 6tml-a1-m1-cD9 254 16 0.0854 0.0276 0.4375 5.9 6tml-a1-m1-cD9_6tml-a1-m1-cd9
24 4kqw-a1-m1-cB 324 32 0.1341 0.0340 0.3438 8.8 4kqw-a1-m1-cB_4kqw-a1-m1-cA
25 4kqw-a1-m1-cA 326 32 0.1341 0.0337 0.3438 8.8 4kqw-a1-m1-cB_4kqw-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600