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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
SHMTPIIHLKGDRNSLKCLRYRLRKHSDHYRDISSTWHWTTGILTVTYHSETQRTKFLNT
VAIPDSVQILVGYMTM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1f9f-a2-m1-cC 76 76 1.0000 1.0000 1.0000 1.09e-52 1f9f-a2-m1-cC_1f9f-a2-m1-cD
2 1f9f-a2-m1-cD 82 82 1.0000 0.9268 0.9268 2.56e-50 1f9f-a2-m1-cC_1f9f-a2-m1-cD
3 1a7g-a1-m2-cE 82 80 0.6053 0.5610 0.5750 4.57e-27 1a7g-a1-m1-cE_1a7g-a1-m2-cE
4 1a7g-a1-m1-cE 82 80 0.6053 0.5610 0.5750 4.57e-27 1a7g-a1-m1-cE_1a7g-a1-m2-cE
5 2q79-a1-m2-cA 74 73 0.5395 0.5541 0.5616 2.79e-26 2q79-a1-m1-cA_2q79-a1-m2-cA
6 2q79-a1-m1-cA 74 73 0.5395 0.5541 0.5616 2.79e-26 2q79-a1-m1-cA_2q79-a1-m2-cA
7 1r8h-a7-m1-cC 83 80 0.5395 0.4940 0.5125 3.64e-23 1r8h-a7-m1-cC_1r8h-a7-m1-cD
8 1r8h-a7-m1-cD 87 84 0.5395 0.4713 0.4881 1.56e-22 1r8h-a7-m1-cC_1r8h-a7-m1-cD
9 1r8h-a4-m1-cE 87 84 0.5395 0.4713 0.4881 1.56e-22 1r8h-a4-m1-cB_1r8h-a4-m1-cE
10 1r8h-a4-m1-cB 87 84 0.5395 0.4713 0.4881 1.56e-22 1r8h-a4-m1-cB_1r8h-a4-m1-cE
11 1jjh-a1-m2-cA 77 62 0.2632 0.2597 0.3226 4.46e-08 1jjh-a1-m1-cA_1jjh-a1-m2-cA
12 1jjh-a1-m1-cA 77 62 0.2632 0.2597 0.3226 4.46e-08 1jjh-a1-m1-cA_1jjh-a1-m2-cA
13 1jjh-a3-m3-cC 73 62 0.2632 0.2740 0.3226 1.46e-06 1jjh-a3-m1-cC_1jjh-a3-m3-cC
14 1jjh-a3-m1-cC 73 62 0.2632 0.2740 0.3226 1.46e-06 1jjh-a3-m1-cC_1jjh-a3-m3-cC
15 1jjh-a2-m3-cB 78 63 0.2632 0.2564 0.3175 1.99e-06 1jjh-a2-m1-cB_1jjh-a2-m3-cB
16 1jjh-a2-m1-cB 78 63 0.2632 0.2564 0.3175 1.99e-06 1jjh-a2-m1-cB_1jjh-a2-m3-cB
17 6bus-a1-m1-c2 92 71 0.2632 0.2174 0.2817 5.10e-05 6bus-a1-m1-c1_6bus-a1-m1-c2
18 6bus-a1-m1-c1 92 71 0.2632 0.2174 0.2817 5.10e-05 6bus-a1-m1-c1_6bus-a1-m1-c2
19 6tml-a1-m1-cd9 254 16 0.0921 0.0276 0.4375 5.4 6tml-a1-m1-cD9_6tml-a1-m1-cd9
20 6tml-a1-m1-cD9 254 16 0.0921 0.0276 0.4375 5.4 6tml-a1-m1-cD9_6tml-a1-m1-cd9
21 5xjg-a1-m1-cC 489 30 0.1579 0.0245 0.4000 8.6 5xjg-a1-m1-cA_5xjg-a1-m1-cC
22 5xjg-a1-m1-cA 489 30 0.1579 0.0245 0.4000 8.6 5xjg-a1-m1-cA_5xjg-a1-m1-cC
23 6kbn-a1-m1-cA 498 30 0.1579 0.0241 0.4000 8.6 6kbn-a1-m1-cA_6kbn-a1-m1-cC
24 6kbn-a1-m1-cC 504 30 0.1579 0.0238 0.4000 8.6 6kbn-a1-m1-cA_6kbn-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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