HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=87)
SHMYVIVVYDVNVERVNRVHKLLKTYLFWRQNSVFEGELSKAQLYELEMRLKRIVKEDDS
VLIYIFPGKNFDLHVVGRDKSPVEMII

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	6k2e-a1-m1-cB	87	87	1.0000	1.0000	1.0000	1.35e-59	6k2e-a1-m1-cB_6k2e-a1-m1-cA
2	6k2e-a1-m1-cA	88	87	1.0000	0.9886	1.0000	1.76e-59	6k2e-a1-m1-cB_6k2e-a1-m1-cA
3	7ei1-a1-m1-cR	84	88	0.4713	0.4881	0.4659	3.34e-18	7ei1-a1-m1-cQ_7ei1-a1-m1-cR
4	7ei1-a1-m1-cQ	84	88	0.4713	0.4881	0.4659	3.34e-18	7ei1-a1-m1-cQ_7ei1-a1-m1-cR
5	5g4d-a1-m2-cA	79	63	0.4023	0.4430	0.5556	1.80e-16	5g4d-a1-m1-cA_5g4d-a1-m2-cA
6	5g4d-a1-m1-cA	79	63	0.4023	0.4430	0.5556	1.80e-16	5g4d-a1-m1-cA_5g4d-a1-m2-cA
7	4qr2-a1-m1-cA	83	80	0.3563	0.3735	0.3875	2.48e-07	4qr2-a1-m1-cB_4qr2-a1-m1-cA
8	4qr2-a1-m1-cB	82	80	0.3563	0.3780	0.3875	2.64e-07	4qr2-a1-m1-cB_4qr2-a1-m1-cA
9	7cr8-a6-m1-cF	93	70	0.2874	0.2688	0.3571	5.80e-07	7cr8-a6-m1-cE_7cr8-a6-m1-cF
10	7cr8-a6-m1-cE	93	70	0.2874	0.2688	0.3571	5.80e-07	7cr8-a6-m1-cE_7cr8-a6-m1-cF
11	4es1-a1-m2-cA	95	93	0.3678	0.3368	0.3441	3.74e-06	4es1-a1-m1-cA_4es1-a1-m2-cA
12	4es1-a1-m1-cA	95	93	0.3678	0.3368	0.3441	3.74e-06	4es1-a1-m1-cA_4es1-a1-m2-cA
13	8d3q-a1-m1-cF	98	82	0.3103	0.2755	0.3293	4.85e-05	8d3q-a1-m1-cE_8d3q-a1-m1-cF
14	8d3q-a1-m1-cE	98	82	0.3103	0.2755	0.3293	4.85e-05	8d3q-a1-m1-cE_8d3q-a1-m1-cF
15	7mid-a1-m1-cC	95	87	0.2989	0.2737	0.2989	2.93e-04	7mid-a1-m1-cD_7mid-a1-m1-cC
16	7mid-a1-m1-cD	91	87	0.2989	0.2857	0.2989	3.08e-04	7mid-a1-m1-cD_7mid-a1-m1-cC
17	3oq2-a3-m3-cA	99	75	0.2644	0.2323	0.3067	0.011	3oq2-a3-m3-cA_3oq2-a3-m4-cB
18	3oq2-a3-m1-cA	99	75	0.2644	0.2323	0.3067	0.011	3oq2-a3-m1-cA_3oq2-a3-m4-cB
19	3oq2-a2-m2-cA	99	75	0.2644	0.2323	0.3067	0.011	3oq2-a2-m2-cA_3oq2-a2-m2-cB
20	3oq2-a3-m4-cB	102	75	0.2644	0.2255	0.3067	0.012	3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
21	3oq2-a2-m2-cB	102	75	0.2644	0.2255	0.3067	0.012	3oq2-a2-m2-cA_3oq2-a2-m2-cB
22	2ivy-a1-m2-cA	88	72	0.2874	0.2841	0.3472	0.022	2ivy-a1-m1-cA_2ivy-a1-m2-cA
23	2ivy-a1-m1-cA	88	72	0.2874	0.2841	0.3472	0.022	2ivy-a1-m1-cA_2ivy-a1-m2-cA
24	2wzi-a1-m1-cB	636	44	0.1264	0.0173	0.2500	0.86	2wzi-a1-m1-cB_2wzi-a1-m1-cA

[Back]

Reference:
Jacob Schwartz et al.