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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
SHPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCACPTQPDKVRKILDLV
QSKGEEVSEFFLYLLQQLADAYVDLRPWLLEIGFS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4e9m-a7-m1-cA 97 95 1.0000 0.9794 1.0000 2.70e-67 4e9m-a7-m1-cB_4e9m-a7-m1-cA
2 4e9m-a7-m1-cB 95 95 1.0000 1.0000 1.0000 3.53e-67 4e9m-a7-m1-cB_4e9m-a7-m1-cA
3 4hp8-a1-m2-cA 245 52 0.1684 0.0653 0.3077 0.80 4hp8-a1-m2-cA_4hp8-a1-m2-cB
4 4hp8-a1-m1-cA 245 52 0.1684 0.0653 0.3077 0.80 4hp8-a1-m1-cA_4hp8-a1-m2-cB
5 4hp8-a1-m2-cB 246 52 0.1684 0.0650 0.3077 0.81 4hp8-a1-m1-cA_4hp8-a1-m2-cB, 4hp8-a1-m1-cB_4hp8-a1-m2-cB, 4hp8-a1-m2-cA_4hp8-a1-m2-cB
6 4hp8-a1-m1-cB 246 52 0.1684 0.0650 0.3077 0.81 4hp8-a1-m1-cB_4hp8-a1-m2-cB
7 3i0z-a1-m1-cB 383 47 0.1684 0.0418 0.3404 2.3 3i0z-a1-m1-cA_3i0z-a1-m1-cB
8 3i0z-a1-m1-cA 383 47 0.1684 0.0418 0.3404 2.3 3i0z-a1-m1-cA_3i0z-a1-m1-cB
9 1q1l-a1-m1-cC 327 35 0.1158 0.0336 0.3143 5.8 1q1l-a1-m1-cC_1q1l-a1-m1-cD
10 1q1l-a1-m1-cD 328 35 0.1158 0.0335 0.3143 5.9 1q1l-a1-m1-cC_1q1l-a1-m1-cD, 1q1l-a1-m1-cD_1q1l-a1-m1-cA, 1q1l-a1-m1-cD_1q1l-a1-m1-cB
11 1q1l-a1-m1-cB 330 35 0.1158 0.0333 0.3143 5.9 1q1l-a1-m1-cD_1q1l-a1-m1-cB
12 1q1l-a1-m1-cA 330 35 0.1158 0.0333 0.3143 5.9 1q1l-a1-m1-cD_1q1l-a1-m1-cA
13 3sln-a6-m5-cI 285 41 0.1579 0.0526 0.3659 6.6 3sln-a6-m1-cI_3sln-a6-m5-cI
14 3sln-a6-m1-cI 285 41 0.1579 0.0526 0.3659 6.6 3sln-a6-m1-cI_3sln-a6-m5-cI
15 5gkd-a1-m1-cD 726 31 0.0947 0.0124 0.2903 7.0 5gkd-a1-m1-cA_5gkd-a1-m1-cD
16 5gkd-a1-m1-cA 726 31 0.0947 0.0124 0.2903 7.0 5gkd-a1-m1-cA_5gkd-a1-m1-cD
17 3enm-a2-m1-cB 260 54 0.1789 0.0654 0.3148 9.1 3enm-a2-m1-cB_3enm-a2-m2-cD

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Reference:
Jacob Schwartz et al.

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