Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
SHYYVIFAQDIPNTLEKRLAVREQHLARLKQLQAENRLLTAGPNPAIDDENPSEAGFTGS
TVIAQFENLQAAKDWAAQDPYVEAGVYADVIVKPFKKVF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1mwq-a1-m1-cA 99 99 1.0000 1.0000 1.0000 2.24e-70 1mwq-a1-m1-cB_1mwq-a1-m1-cA
2 1mwq-a1-m1-cB 98 98 0.9899 1.0000 1.0000 1.59e-69 1mwq-a1-m1-cB_1mwq-a1-m1-cA
3 6lp1-a1-m1-cD 466 39 0.1616 0.0343 0.4103 3.0 6lp1-a1-m1-cD_6lp1-a1-m1-cA, 6lp1-a1-m1-cD_6lp1-a1-m1-cC
4 6lp1-a1-m1-cA 467 39 0.1616 0.0343 0.4103 3.0 6lp1-a1-m1-cD_6lp1-a1-m1-cA
5 6lp1-a1-m1-cC 469 39 0.1616 0.0341 0.4103 3.0 6lp1-a1-m1-cD_6lp1-a1-m1-cC
6 6zq5-a1-m1-cB 510 17 0.0909 0.0176 0.5294 9.2 6zq5-a1-m1-cA_6zq5-a1-m1-cB
7 6zq5-a1-m1-cA 510 17 0.0909 0.0176 0.5294 9.2 6zq5-a1-m1-cA_6zq5-a1-m1-cB
8 6zq4-a4-m3-cG 512 17 0.0909 0.0176 0.5294 9.2 6zq4-a4-m1-cF_6zq4-a4-m3-cG
9 6zq4-a4-m1-cF 512 17 0.0909 0.0176 0.5294 9.2 6zq4-a4-m1-cF_6zq4-a4-m3-cG
10 3mvg-a1-m1-cA 251 31 0.1515 0.0598 0.4839 9.5 3mvg-a1-m1-cB_3mvg-a1-m1-cA
11 2cbt-a1-m1-cB 111 39 0.1515 0.1351 0.3846 9.8 2cbt-a1-m1-cA_2cbt-a1-m1-cB
12 2cbt-a1-m1-cA 111 39 0.1515 0.1351 0.3846 9.8 2cbt-a1-m1-cA_2cbt-a1-m1-cB
13 3mvg-a1-m1-cB 250 31 0.1515 0.0600 0.4839 9.8 3mvg-a1-m1-cB_3mvg-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600