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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
SIDDLDAEALIRMALGPRNTMTSSNEQLVDALRASLKENEELRKESRRRADRRQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3f5h-a1-m1-cA 54 54 1.0000 1.0000 1.0000 4.35e-32 3f5h-a1-m1-cA_3f5h-a1-m1-cB
2 3f5h-a1-m1-cB 57 54 1.0000 0.9474 1.0000 5.29e-32 3f5h-a1-m1-cA_3f5h-a1-m1-cB
3 4gbd-a1-m1-cA 435 27 0.2037 0.0253 0.4074 1.9 4gbd-a1-m1-cB_4gbd-a1-m1-cA
4 4gbd-a1-m1-cB 434 27 0.2037 0.0253 0.4074 1.9 4gbd-a1-m1-cB_4gbd-a1-m1-cA
5 7q5s-a1-m1-cK 2039 33 0.2407 0.0064 0.3939 4.7 7q5s-a1-m1-cI_7q5s-a1-m1-cK
6 7q5s-a1-m1-cI 2039 33 0.2407 0.0064 0.3939 4.7 7q5s-a1-m1-cI_7q5s-a1-m1-cK
7 3ces-a2-m1-cC 516 34 0.2037 0.0213 0.3235 9.0 3ces-a2-m1-cD_3ces-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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