Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
SIMIPTHSTGGLHQGTEGWHRTNNVKNFLMRVEKWSLRNPGYTALIAILGWTLGTTTAQK
VIFIALLLMIAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7esd-a1-m9-cF 72 72 1.0000 1.0000 1.0000 2.06e-48 7esd-a1-m9-cD_7esd-a1-m9-cF
2 7esd-a1-m9-cD 72 72 1.0000 1.0000 1.0000 2.06e-48 7esd-a1-m9-cD_7esd-a1-m9-cF
3 7kvb-a1-m9-cb 71 67 0.3889 0.3944 0.4179 1.29e-15 7kvb-a1-m9-ca_7kvb-a1-m9-cb
4 7kvb-a1-m9-ca 71 67 0.3889 0.3944 0.4179 1.29e-15 7kvb-a1-m9-ca_7kvb-a1-m9-cb
5 4cbf-a1-m9-cF 74 72 0.3333 0.3243 0.3333 1.20e-11 4cbf-a1-m9-cD_4cbf-a1-m9-cF
6 4cbf-a1-m9-cD 74 72 0.3333 0.3243 0.3333 1.20e-11 4cbf-a1-m9-cD_4cbf-a1-m9-cF
7 7kva-a1-m9-cc 71 67 0.3750 0.3803 0.4030 1.42e-09 7kva-a1-m55-cc_7kva-a1-m9-cc
8 7kva-a1-m55-cc 71 67 0.3750 0.3803 0.4030 1.42e-09 7kva-a1-m55-cc_7kva-a1-m9-cc
9 4c2i-a1-m9-cF 72 72 0.3194 0.3194 0.3194 3.28e-08 4c2i-a1-m9-cD_4c2i-a1-m9-cF
10 4c2i-a1-m9-cD 72 72 0.3194 0.3194 0.3194 3.28e-08 4c2i-a1-m9-cD_4c2i-a1-m9-cF
11 4b03-a1-m9-cF 166 72 0.3194 0.1386 0.3194 1.61e-07 4b03-a1-m10-cE_4b03-a1-m9-cF
12 4b03-a1-m9-cE 166 72 0.3194 0.1386 0.3194 1.61e-07 4b03-a1-m9-cD_4b03-a1-m9-cE
13 4b03-a1-m9-cD 166 72 0.3194 0.1386 0.3194 1.61e-07 4b03-a1-m54-cD_4b03-a1-m9-cD, 4b03-a1-m9-cD_4b03-a1-m9-cE
14 4b03-a1-m54-cD 166 72 0.3194 0.1386 0.3194 1.61e-07 4b03-a1-m54-cD_4b03-a1-m9-cD
15 4b03-a1-m10-cE 166 72 0.3194 0.1386 0.3194 1.61e-07 4b03-a1-m10-cE_4b03-a1-m9-cF
16 5tgt-a1-m1-cA 461 29 0.1806 0.0282 0.4483 1.1 5tgt-a1-m1-cB_5tgt-a1-m1-cA
17 5tgt-a1-m1-cB 453 29 0.1806 0.0287 0.4483 1.1 5tgt-a1-m1-cB_5tgt-a1-m1-cA
18 3abi-a1-m1-cB 345 19 0.1250 0.0261 0.4737 5.3 3abi-a1-m1-cB_3abi-a1-m1-cA
19 3abi-a1-m1-cA 349 19 0.1250 0.0258 0.4737 5.3 3abi-a1-m1-cB_3abi-a1-m1-cA
20 4axs-a1-m2-cA 291 32 0.1250 0.0309 0.2812 9.1 4axs-a1-m1-cA_4axs-a1-m2-cA
21 4axs-a1-m1-cA 291 32 0.1250 0.0309 0.2812 9.1 4axs-a1-m1-cA_4axs-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600