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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SIPEDYQARLQPNRVEGSYPLVREFTGATVDAPLSQISRKYNIDVSILSSDLDYAGGVKF
GVAELFGNEQDDSAAIEYLRENNVKVEVLGYVL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qrr-a1-m1-cA 93 93 1.0000 1.0000 1.0000 1.47e-63 2qrr-a1-m1-cA_2qrr-a1-m1-cB
2 2qrr-a1-m1-cB 94 93 1.0000 0.9894 1.0000 1.50e-63 2qrr-a1-m1-cA_2qrr-a1-m1-cB
3 6cvl-a1-m1-cC 343 95 0.5591 0.1516 0.5474 2.84e-28 6cvl-a1-m1-cC_6cvl-a1-m1-cD
4 6cvl-a1-m1-cD 344 95 0.5591 0.1512 0.5474 3.48e-28 6cvl-a1-m1-cC_6cvl-a1-m1-cD
5 3tui-a2-m1-cH 344 95 0.5591 0.1512 0.5474 4.52e-28 3tui-a2-m1-cG_3tui-a2-m1-cH
6 3tui-a2-m1-cG 343 95 0.5591 0.1516 0.5474 5.10e-28 3tui-a2-m1-cG_3tui-a2-m1-cH
7 2qsw-a1-m2-cA 89 69 0.2688 0.2809 0.3623 2.34e-05 2qsw-a1-m1-cA_2qsw-a1-m2-cA
8 2qsw-a1-m1-cA 89 69 0.2688 0.2809 0.3623 2.34e-05 2qsw-a1-m1-cA_2qsw-a1-m2-cA
9 3lqw-a1-m3-cA 129 64 0.2366 0.1705 0.3438 1.4 3lqw-a1-m2-cA_3lqw-a1-m3-cA
10 3lqw-a1-m2-cA 129 64 0.2366 0.1705 0.3438 1.4 3lqw-a1-m2-cA_3lqw-a1-m3-cA
11 2i4l-a1-m1-cB 441 41 0.1613 0.0340 0.3659 2.4 2i4l-a1-m1-cA_2i4l-a1-m1-cB
12 2i4l-a1-m1-cA 439 41 0.1613 0.0342 0.3659 2.4 2i4l-a1-m1-cA_2i4l-a1-m1-cB
13 7dlv-a2-m1-cI 136 41 0.1935 0.1324 0.4390 3.9 7dlv-a2-m1-cG_7dlv-a2-m1-cI
14 7dlv-a2-m1-cG 136 41 0.1935 0.1324 0.4390 3.9 7dlv-a2-m1-cG_7dlv-a2-m1-cI

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Reference:
Jacob Schwartz et al.

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