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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
SISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARR
LMEAVARDKAGHSAFTKSVDELREMA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oei-a3-m1-cJ 86 86 1.0000 1.0000 1.0000 1.30e-59 3oei-a3-m1-cI_3oei-a3-m1-cJ
2 3d55-a4-m1-cC 86 85 0.9884 0.9884 1.0000 4.60e-59 3d55-a4-m1-cA_3d55-a4-m1-cC, 3d55-a4-m2-cB_3d55-a4-m1-cC
3 3cto-a5-m5-cC 86 85 0.9884 0.9884 1.0000 4.60e-59 3cto-a5-m1-cD_3cto-a5-m5-cC
4 3d55-a4-m2-cB 84 83 0.9651 0.9881 1.0000 2.14e-57 3d55-a4-m2-cB_3d55-a4-m1-cC
5 3cto-a7-m1-cB 83 83 0.9651 1.0000 1.0000 2.24e-57 3cto-a7-m1-cA_3cto-a7-m1-cB
6 3cto-a6-m1-cB 83 83 0.9651 1.0000 1.0000 2.24e-57 3cto-a6-m5-cA_3cto-a6-m1-cB
7 3oei-a3-m1-cI 83 86 0.9535 0.9880 0.9535 8.00e-54 3oei-a3-m1-cI_3oei-a3-m1-cJ
8 3d55-a4-m1-cA 68 67 0.7791 0.9853 1.0000 1.36e-44 3d55-a4-m1-cA_3d55-a4-m1-cC
9 3cto-a7-m1-cA 68 67 0.7791 0.9853 1.0000 1.36e-44 3cto-a7-m1-cA_3cto-a7-m1-cB, 3cto-a7-m1-cD_3cto-a7-m1-cA
10 3cto-a6-m5-cA 68 67 0.7791 0.9853 1.0000 1.36e-44 3cto-a6-m5-cA_3cto-a6-m1-cB
11 3cto-a7-m1-cD 65 65 0.7558 1.0000 1.0000 2.62e-43 3cto-a7-m1-cD_3cto-a7-m1-cA
12 3cto-a5-m1-cD 65 65 0.7558 1.0000 1.0000 2.62e-43 3cto-a5-m1-cD_3cto-a5-m5-cC
13 2a6q-a3-m1-cC 86 72 0.4186 0.4186 0.5000 1.74e-17 2a6q-a3-m1-cD_2a6q-a3-m1-cC
14 2a6q-a3-m1-cA 86 72 0.4186 0.4186 0.5000 1.74e-17 2a6q-a3-m1-cD_2a6q-a3-m1-cA
15 6l8e-a1-m1-cA 83 77 0.3488 0.3614 0.3896 3.24e-10 6l8e-a1-m1-cB_6l8e-a1-m1-cA
16 2a6q-a3-m1-cD 58 53 0.2907 0.4310 0.4717 3.79e-09 2a6q-a3-m1-cB_2a6q-a3-m1-cD, 2a6q-a3-m1-cD_2a6q-a3-m1-cA, 2a6q-a3-m1-cD_2a6q-a3-m1-cC
17 2a6q-a3-m1-cB 58 53 0.2907 0.4310 0.4717 3.79e-09 2a6q-a3-m1-cB_2a6q-a3-m1-cD
18 7v6w-a2-m1-cI 56 51 0.2093 0.3214 0.3529 1.37e-07 7v6w-a2-m1-cI_7v6w-a2-m1-cJ, 7v6w-a2-m1-cI_7v6w-a2-m1-cK
19 7v6w-a2-m1-cK 58 51 0.2093 0.3103 0.3529 1.39e-07 7v6w-a2-m1-cI_7v6w-a2-m1-cK
20 7v6w-a2-m1-cJ 85 51 0.2093 0.2118 0.3529 4.24e-07 7v6w-a2-m1-cI_7v6w-a2-m1-cJ
21 6l8e-a2-m1-cJ 59 53 0.2558 0.3729 0.4151 4.10e-06 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
22 6l8e-a1-m1-cB 54 48 0.2442 0.3889 0.4375 3.18e-05 6l8e-a1-m1-cB_6l8e-a1-m1-cA
23 6l8e-a2-m1-cL 57 48 0.2442 0.3684 0.4375 3.98e-05 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
24 3g5o-a1-m1-cD 92 80 0.2791 0.2609 0.3000 0.005 3g5o-a1-m1-cA_3g5o-a1-m1-cD
25 3g5o-a1-m1-cA 92 80 0.2791 0.2609 0.3000 0.005 3g5o-a1-m1-cA_3g5o-a1-m1-cD
26 1lam-a1-m6-cA 484 48 0.1977 0.0351 0.3542 0.96 1lam-a1-m2-cA_1lam-a1-m6-cA, 1lam-a1-m3-cA_1lam-a1-m6-cA, 1lam-a1-m5-cA_1lam-a1-m6-cA
27 1lam-a1-m5-cA 484 48 0.1977 0.0351 0.3542 0.96 1lam-a1-m5-cA_1lam-a1-m6-cA
28 1lam-a1-m3-cA 484 48 0.1977 0.0351 0.3542 0.96 1lam-a1-m3-cA_1lam-a1-m6-cA
29 1lam-a1-m2-cA 484 48 0.1977 0.0351 0.3542 0.96 1lam-a1-m2-cA_1lam-a1-m6-cA
30 8bd7-a1-m1-cK 619 49 0.1977 0.0275 0.3469 4.1 8bd7-a1-m1-cC_8bd7-a1-m1-cK
31 8bd7-a1-m1-cC 619 49 0.1977 0.0275 0.3469 4.1 8bd7-a1-m1-cC_8bd7-a1-m1-cK

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Reference:
Jacob Schwartz et al.

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