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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVE
AEIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xtd-a1-m2-cA 68 64 1.0000 0.9412 1.0000 1.72e-41 2xtd-a1-m2-cB_2xtd-a1-m2-cA
2 2xtd-a1-m2-cB 64 64 1.0000 1.0000 1.0000 2.22e-41 2xtd-a1-m2-cB_2xtd-a1-m2-cA
3 2is5-a1-m1-cD 143 53 0.2500 0.1119 0.3019 0.70 2is5-a1-m1-cD_2is5-a1-m1-cA
4 4uzi-a1-m1-cB 446 41 0.2031 0.0291 0.3171 2.0 4uzi-a1-m1-cA_4uzi-a1-m1-cB
5 4uzi-a1-m1-cA 446 41 0.2031 0.0291 0.3171 2.0 4uzi-a1-m1-cA_4uzi-a1-m1-cB
6 3gcu-a2-m1-cB 337 23 0.1562 0.0297 0.4348 5.3 3gcu-a2-m1-cB_3gcu-a2-m1-cA
7 3c5u-a1-m2-cA 338 23 0.1562 0.0296 0.4348 5.3 3c5u-a1-m1-cA_3c5u-a1-m2-cA
8 3c5u-a1-m1-cA 338 23 0.1562 0.0296 0.4348 5.3 3c5u-a1-m1-cA_3c5u-a1-m2-cA
9 3gcu-a2-m1-cA 339 23 0.1562 0.0295 0.4348 5.3 3gcu-a2-m1-cB_3gcu-a2-m1-cA
10 3oht-a1-m1-cB 331 23 0.1562 0.0302 0.4348 7.0 3oht-a1-m1-cA_3oht-a1-m1-cB
11 3oht-a1-m1-cA 331 23 0.1562 0.0302 0.4348 7.0 3oht-a1-m1-cA_3oht-a1-m1-cB
12 3n5o-a2-m2-cB 214 27 0.2031 0.0607 0.4815 8.9 3n5o-a2-m1-cB_3n5o-a2-m2-cB, 3n5o-a2-m2-cB_3n5o-a2-m2-cA
13 3n5o-a2-m1-cB 214 27 0.2031 0.0607 0.4815 8.9 3n5o-a2-m1-cB_3n5o-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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