Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
SKFYKIWLIFDPRRVFVAQGVFLFLLAVMIHLMLLSNPGFNWLDISGVKYERV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ddq-a1-m1-cg 53 53 1.0000 1.0000 1.0000 1.26e-33 7ddq-a1-m1-cf_7ddq-a1-m1-cg
2 7ddq-a1-m1-cf 53 53 1.0000 1.0000 1.0000 1.26e-33 7ddq-a1-m1-cf_7ddq-a1-m1-cg
3 7vrj-a1-m1-cK 43 43 0.4906 0.6047 0.6047 2.65e-12 7vrj-a1-m1-cI_7vrj-a1-m1-cK
4 7vrj-a1-m1-cI 43 43 0.4906 0.6047 0.6047 2.65e-12 7vrj-a1-m1-cI_7vrj-a1-m1-cK
5 7vrj-a1-m1-cW 55 52 0.4528 0.4364 0.4615 1.17e-10 7vrj-a1-m1-cW_7vrj-a1-m1-cY
6 7vrj-a1-m1-cY 62 53 0.4528 0.3871 0.4528 1.38e-10 7vrj-a1-m1-cW_7vrj-a1-m1-cY
7 5y5s-a1-m1-cY 57 44 0.4151 0.3860 0.5000 3.12e-09 5y5s-a1-m1-c1_5y5s-a1-m1-cY
8 5y5s-a1-m1-cA 54 44 0.4151 0.4074 0.5000 3.15e-09 5y5s-a1-m1-cA_5y5s-a1-m1-cD
9 5y5s-a1-m1-cD 55 44 0.4151 0.4000 0.5000 3.48e-09 5y5s-a1-m1-cA_5y5s-a1-m1-cD
10 5y5s-a1-m1-c1 56 44 0.4151 0.3929 0.5000 3.59e-09 5y5s-a1-m1-c1_5y5s-a1-m1-cY
11 6zxa-a1-m1-cM 69 41 0.2642 0.2029 0.3415 2.8 6zxa-a1-m1-cK_6zxa-a1-m1-cM
12 6zxa-a1-m1-cK 69 41 0.2642 0.2029 0.3415 2.8 6zxa-a1-m1-cK_6zxa-a1-m1-cM
13 3lg7-a1-m1-cB 123 18 0.1509 0.0650 0.4444 3.6 3lg7-a1-m1-cC_3lg7-a1-m1-cB
14 3lg7-a1-m1-cC 122 18 0.1509 0.0656 0.4444 3.7 3lg7-a1-m1-cC_3lg7-a1-m1-cB
15 1qzz-a2-m2-cA 340 31 0.2642 0.0412 0.4516 5.1 1qzz-a2-m1-cA_1qzz-a2-m2-cA
16 1qzz-a2-m1-cA 340 31 0.2642 0.0412 0.4516 5.1 1qzz-a2-m1-cA_1qzz-a2-m2-cA
17 3n1i-a2-m3-cA 161 39 0.3019 0.0994 0.4103 6.6 3n1i-a2-m23-cA_3n1i-a2-m3-cA
18 3n1i-a2-m23-cA 161 39 0.3019 0.0994 0.4103 6.6 3n1i-a2-m23-cA_3n1i-a2-m3-cA
19 3n1i-a1-m9-cA 161 39 0.3019 0.0994 0.4103 6.6 3n1i-a1-m19-cA_3n1i-a1-m9-cA, 3n1i-a1-m6-cA_3n1i-a1-m9-cA
20 3n1i-a1-m6-cA 161 39 0.3019 0.0994 0.4103 6.6 3n1i-a1-m6-cA_3n1i-a1-m9-cA
21 3n1i-a1-m19-cA 161 39 0.3019 0.0994 0.4103 6.6 3n1i-a1-m19-cA_3n1i-a1-m9-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600