Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
SKGRDILTKTIILALREVAPGLEAVLEAHLRATLNSGIELAYDDPQKFKEAVSKLFGEYS
ARLLEMVIISKLKGRLGEDIEANSLEELVSEIRKIYGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p9x-a2-m2-cC 98 98 1.0000 1.0000 1.0000 3.96e-65 2p9x-a2-m1-cA_2p9x-a2-m2-cC, 2p9x-a2-m2-cB_2p9x-a2-m2-cC
2 2p9x-a2-m1-cA 98 98 1.0000 1.0000 1.0000 3.96e-65 2p9x-a2-m1-cA_2p9x-a2-m2-cC
3 2p9x-a1-m1-cD 98 98 1.0000 1.0000 1.0000 3.96e-65 2p9x-a1-m1-cB_2p9x-a1-m1-cD, 2p9x-a1-m1-cC_2p9x-a1-m1-cD
4 2p9x-a1-m1-cC 98 98 1.0000 1.0000 1.0000 3.96e-65 2p9x-a1-m1-cC_2p9x-a1-m1-cD
5 2p9x-a2-m2-cB 95 97 0.9694 1.0000 0.9794 6.05e-61 2p9x-a2-m2-cB_2p9x-a2-m2-cC
6 2p9x-a1-m1-cB 95 97 0.9694 1.0000 0.9794 6.05e-61 2p9x-a1-m1-cB_2p9x-a1-m1-cD
7 6j94-a1-m1-cA 457 40 0.1735 0.0372 0.4250 0.60 6j94-a1-m1-cA_6j94-a1-m1-cB
8 1zcc-a1-m1-cB 228 38 0.1735 0.0746 0.4474 1.6 1zcc-a1-m1-cB_1zcc-a1-m1-cC, 1zcc-a1-m1-cB_1zcc-a1-m1-cE
9 1zcc-a1-m1-cA 240 38 0.1735 0.0708 0.4474 1.6 1zcc-a1-m1-cE_1zcc-a1-m1-cA
10 1zcc-a1-m1-cC 233 38 0.1735 0.0730 0.4474 1.7 1zcc-a1-m1-cB_1zcc-a1-m1-cC
11 1zcc-a1-m1-cE 233 38 0.1735 0.0730 0.4474 1.7 1zcc-a1-m1-cB_1zcc-a1-m1-cE, 1zcc-a1-m1-cE_1zcc-a1-m1-cA
12 6j94-a1-m1-cB 457 40 0.1735 0.0372 0.4250 1.8 6j94-a1-m1-cA_6j94-a1-m1-cB
13 7a5c-a1-m1-cB 314 47 0.1735 0.0541 0.3617 2.1 7a5c-a1-m1-cA_7a5c-a1-m1-cB
14 7a5c-a1-m1-cA 314 47 0.1735 0.0541 0.3617 2.1 7a5c-a1-m1-cA_7a5c-a1-m1-cB
15 5lbm-a1-m1-cB 82 24 0.1224 0.1463 0.5000 2.2 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
16 5lbm-a1-m1-cA 82 24 0.1224 0.1463 0.5000 2.2 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
17 5lbm-a1-m1-cD 89 24 0.1224 0.1348 0.5000 2.9 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
18 5lbm-a1-m1-cC 89 24 0.1224 0.1348 0.5000 2.9 5lbm-a1-m1-cC_5lbm-a1-m1-cD
19 3lw9-a4-m4-cB 163 47 0.1633 0.0982 0.3404 6.2 3lw9-a4-m2-cB_3lw9-a4-m4-cB, 3lw9-a4-m3-cB_3lw9-a4-m4-cB
20 3lw9-a4-m3-cB 163 47 0.1633 0.0982 0.3404 6.2 3lw9-a4-m3-cB_3lw9-a4-m4-cB
21 3lw9-a4-m2-cB 163 47 0.1633 0.0982 0.3404 6.2 3lw9-a4-m2-cB_3lw9-a4-m4-cB
22 7m3k-a1-m4-cA 587 66 0.2653 0.0443 0.3939 6.5 7m3k-a1-m1-cA_7m3k-a1-m4-cA, 7m3k-a1-m2-cA_7m3k-a1-m4-cA, 7m3k-a1-m3-cA_7m3k-a1-m4-cA
23 7m3k-a1-m3-cA 587 66 0.2653 0.0443 0.3939 6.5 7m3k-a1-m3-cA_7m3k-a1-m4-cA
24 7m3k-a1-m2-cA 587 66 0.2653 0.0443 0.3939 6.5 7m3k-a1-m2-cA_7m3k-a1-m4-cA
25 7m3k-a1-m1-cA 587 66 0.2653 0.0443 0.3939 6.5 7m3k-a1-m1-cA_7m3k-a1-m4-cA
26 1vbh-a1-m2-cA 862 83 0.2347 0.0267 0.2771 8.3 1vbh-a1-m1-cA_1vbh-a1-m2-cA
27 1vbh-a1-m1-cA 862 83 0.2347 0.0267 0.2771 8.3 1vbh-a1-m1-cA_1vbh-a1-m2-cA
28 5ym0-a2-m2-cA 520 56 0.2143 0.0404 0.3750 9.6 5ym0-a2-m1-cA_5ym0-a2-m2-cA
29 5ym0-a2-m1-cA 520 56 0.2143 0.0404 0.3750 9.6 5ym0-a2-m1-cA_5ym0-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600