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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
SKITINIKDNTIEYGHKEFVLSNLQEDIKNLAEIVYQLAKLIEKLSQYEEEVDTELYNLL
HEYAIYLAGATSFIDSENK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rkl-a1-m2-cD 79 79 1.0000 1.0000 1.0000 4.65e-51 3rkl-a1-m1-cD_3rkl-a1-m2-cD, 3rkl-a1-m2-cB_3rkl-a1-m2-cD
2 3rkl-a1-m2-cB 79 79 1.0000 1.0000 1.0000 4.65e-51 3rkl-a1-m2-cB_3rkl-a1-m2-cD
3 3rkl-a1-m1-cD 79 79 1.0000 1.0000 1.0000 4.65e-51 3rkl-a1-m1-cD_3rkl-a1-m2-cD
4 2akf-a1-m1-cC 32 32 0.1899 0.4688 0.4688 1.5 2akf-a1-m1-cA_2akf-a1-m1-cC
5 2akf-a1-m1-cA 32 32 0.1899 0.4688 0.4688 1.5 2akf-a1-m1-cA_2akf-a1-m1-cC
6 1vko-a1-m4-cA 511 47 0.2152 0.0333 0.3617 2.9 1vko-a1-m1-cA_1vko-a1-m4-cA, 1vko-a1-m2-cA_1vko-a1-m4-cA, 1vko-a1-m3-cA_1vko-a1-m4-cA
7 1vko-a1-m3-cA 511 47 0.2152 0.0333 0.3617 2.9 1vko-a1-m3-cA_1vko-a1-m4-cA
8 1vko-a1-m2-cA 511 47 0.2152 0.0333 0.3617 2.9 1vko-a1-m2-cA_1vko-a1-m4-cA
9 1vko-a1-m1-cA 511 47 0.2152 0.0333 0.3617 2.9 1vko-a1-m1-cA_1vko-a1-m4-cA
10 1n7v-a1-m2-cA 533 17 0.1266 0.0188 0.5882 5.8 1n7v-a1-m1-cA_1n7v-a1-m2-cA
11 1n7v-a1-m1-cA 533 17 0.1266 0.0188 0.5882 5.8 1n7v-a1-m1-cA_1n7v-a1-m2-cA
12 4ywz-a1-m1-cB 145 52 0.2405 0.1310 0.3654 6.2 4ywz-a1-m1-cB_4ywz-a1-m1-cA
13 4ywz-a1-m1-cA 146 51 0.2278 0.1233 0.3529 7.4 4ywz-a1-m1-cB_4ywz-a1-m1-cA
14 7xux-a1-m1-cB 361 38 0.1646 0.0360 0.3421 8.0 7xux-a1-m1-cB_7xux-a1-m1-cA
15 7xux-a1-m1-cA 365 39 0.1646 0.0356 0.3333 8.3 7xux-a1-m1-cB_7xux-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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