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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
SKLEELRRKLQEAEHKARELQEKWG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6c52-a1-m1-cD 25 25 1.0000 1.0000 1.0000 2.11e-10 6c52-a1-m1-cA_6c52-a1-m1-cD, 6c52-a1-m1-cC_6c52-a1-m1-cD
2 6c52-a1-m1-cC 25 25 1.0000 1.0000 1.0000 2.11e-10 6c52-a1-m1-cC_6c52-a1-m1-cD
3 6c52-a1-m1-cA 25 25 1.0000 1.0000 1.0000 2.11e-10 6c52-a1-m1-cA_6c52-a1-m1-cD
4 3iav-a2-m1-cB 521 24 0.4000 0.0192 0.4167 2.1 3iav-a2-m1-cA_3iav-a2-m1-cB
5 3iav-a2-m1-cA 521 24 0.4000 0.0192 0.4167 2.1 3iav-a2-m1-cA_3iav-a2-m1-cB
6 3iav-a1-m3-cB 521 24 0.4000 0.0192 0.4167 2.1 3iav-a1-m2-cB_3iav-a1-m3-cB
7 3iav-a1-m2-cB 521 24 0.4000 0.0192 0.4167 2.1 3iav-a1-m2-cB_3iav-a1-m3-cB
8 7s6b-a1-m1-cA 893 19 0.3600 0.0101 0.4737 3.8 7s6b-a1-m1-cB_7s6b-a1-m1-cA
9 7s6b-a1-m1-cB 879 19 0.3600 0.0102 0.4737 4.1 7s6b-a1-m1-cB_7s6b-a1-m1-cA
10 2pff-a1-m2-cG 1683 23 0.4000 0.0059 0.4348 5.1 2pff-a1-m1-cA_2pff-a1-m2-cG, 2pff-a1-m1-cD_2pff-a1-m2-cG, 2pff-a1-m1-cG_2pff-a1-m2-cG, 2pff-a1-m2-cD_2pff-a1-m2-cG
11 2pff-a1-m2-cD 1683 23 0.4000 0.0059 0.4348 5.1 2pff-a1-m2-cD_2pff-a1-m2-cG
12 2pff-a1-m1-cG 1683 23 0.4000 0.0059 0.4348 5.1 2pff-a1-m1-cG_2pff-a1-m2-cG
13 2pff-a1-m1-cD 1683 23 0.4000 0.0059 0.4348 5.1 2pff-a1-m1-cD_2pff-a1-m2-cG
14 2pff-a1-m1-cA 1683 23 0.4000 0.0059 0.4348 5.1 2pff-a1-m1-cA_2pff-a1-m2-cG

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Reference:
Jacob Schwartz et al.

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