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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
SKPDCTAARDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRR
QVQSLTEVDALKG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3trt-a1-m1-cA 73 73 1.0000 1.0000 1.0000 2.38e-48 3trt-a1-m1-cB_3trt-a1-m1-cA
2 3trt-a1-m1-cB 71 71 0.9726 1.0000 1.0000 1.48e-46 3trt-a1-m1-cB_3trt-a1-m1-cA
3 3klt-a3-m1-cC 71 71 0.9315 0.9577 0.9577 8.22e-40 3klt-a3-m1-cD_3klt-a3-m1-cC
4 3klt-a1-m1-cB 71 71 0.9315 0.9577 0.9577 4.08e-39 3klt-a1-m1-cD_3klt-a1-m1-cB
5 3klt-a1-m1-cA 71 71 0.9315 0.9577 0.9577 4.08e-39 3klt-a1-m1-cD_3klt-a1-m1-cA
6 3klt-a3-m1-cD 70 67 0.8904 0.9286 0.9701 1.07e-38 3klt-a3-m1-cD_3klt-a3-m1-cC
7 3klt-a1-m1-cD 70 67 0.8904 0.9286 0.9701 1.07e-38 3klt-a1-m1-cD_3klt-a1-m1-cA, 3klt-a1-m1-cD_3klt-a1-m1-cB
8 5imt-a1-m2-cA 460 66 0.2329 0.0370 0.2576 0.99 5imt-a1-m1-cA_5imt-a1-m2-cA
9 5imt-a1-m1-cA 460 66 0.2329 0.0370 0.2576 0.99 5imt-a1-m1-cA_5imt-a1-m2-cA
10 1s3r-a4-m2-cB 473 66 0.2329 0.0359 0.2576 1.2 1s3r-a4-m1-cA_1s3r-a4-m2-cB, 1s3r-a4-m1-cB_1s3r-a4-m2-cB, 1s3r-a4-m2-cA_1s3r-a4-m2-cB
11 1s3r-a4-m2-cA 473 66 0.2329 0.0359 0.2576 1.2 1s3r-a4-m2-cA_1s3r-a4-m2-cB
12 1s3r-a4-m1-cB 473 66 0.2329 0.0359 0.2576 1.2 1s3r-a4-m1-cB_1s3r-a4-m2-cB
13 1s3r-a4-m1-cA 473 66 0.2329 0.0359 0.2576 1.2 1s3r-a4-m1-cA_1s3r-a4-m2-cB
14 6vjf-a2-m1-cC 365 69 0.2466 0.0493 0.2609 1.5 6vjf-a2-m1-cD_6vjf-a2-m1-cC
15 6zd0-a1-m1-cE 460 66 0.2329 0.0370 0.2576 2.1 6zd0-a1-m1-cA_6zd0-a1-m1-cE
16 6zd0-a1-m1-cA 460 66 0.2329 0.0370 0.2576 2.1 6zd0-a1-m1-cA_6zd0-a1-m1-cE
17 2oso-a1-m2-cA 152 38 0.1233 0.0592 0.2368 2.2 2oso-a1-m1-cA_2oso-a1-m2-cA
18 2oso-a1-m1-cA 152 38 0.1233 0.0592 0.2368 2.2 2oso-a1-m1-cA_2oso-a1-m2-cA
19 7x5d-a1-m2-cA 99 60 0.2192 0.1616 0.2667 5.8 7x5d-a1-m2-cB_7x5d-a1-m2-cA
20 7x5d-a1-m1-cA 99 60 0.2192 0.1616 0.2667 5.8 7x5d-a1-m2-cB_7x5d-a1-m1-cA
21 7x5d-a1-m2-cB 94 60 0.2192 0.1702 0.2667 7.1 7x5d-a1-m2-cB_7x5d-a1-m1-cA, 7x5d-a1-m2-cB_7x5d-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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