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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
SKSLVDTVYALKDEVQELRQDNKKKKSLEEEQRARKDLEKLVRKVLKNND

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w6b-a1-m3-cA 50 50 1.0000 1.0000 1.0000 1.01e-27 2w6b-a1-m2-cA_2w6b-a1-m3-cA
2 2w6b-a1-m2-cA 50 50 1.0000 1.0000 1.0000 1.01e-27 2w6b-a1-m2-cA_2w6b-a1-m3-cA
3 7tzb-a1-m1-cA 463 35 0.3200 0.0346 0.4571 0.26 7tzb-a1-m1-cB_7tzb-a1-m1-cA
4 1wle-a1-m1-cA 465 35 0.3000 0.0323 0.4286 0.83 1wle-a1-m1-cA_1wle-a1-m1-cB
5 1wle-a1-m1-cB 469 35 0.3000 0.0320 0.4286 1.0 1wle-a1-m1-cA_1wle-a1-m1-cB
6 7tzb-a1-m1-cB 461 33 0.3000 0.0325 0.4545 1.4 7tzb-a1-m1-cB_7tzb-a1-m1-cA
7 7nwu-a2-m1-cH 250 36 0.2800 0.0560 0.3889 1.6 7nwu-a2-m1-cF_7nwu-a2-m1-cH
8 7nwu-a2-m1-cF 250 36 0.2800 0.0560 0.3889 1.6 7nwu-a2-m1-cF_7nwu-a2-m1-cH
9 7qg6-a4-m1-cB 248 36 0.2800 0.0565 0.3889 1.6 7qg6-a4-m1-cD_7qg6-a4-m1-cB
10 7qg6-a4-m1-cD 245 36 0.2800 0.0571 0.3889 1.7 7qg6-a4-m1-cD_7qg6-a4-m1-cB, 7qg6-a4-m1-cD_7qg6-a4-m1-cF
11 7qg6-a4-m1-cF 246 36 0.2800 0.0569 0.3889 1.7 7qg6-a4-m1-cD_7qg6-a4-m1-cF
12 4fn4-a1-m1-cD 254 49 0.3200 0.0630 0.3265 2.0 4fn4-a1-m1-cA_4fn4-a1-m1-cD, 4fn4-a1-m1-cB_4fn4-a1-m1-cD, 4fn4-a1-m1-cC_4fn4-a1-m1-cD
13 4fn4-a1-m1-cC 254 49 0.3200 0.0630 0.3265 2.0 4fn4-a1-m1-cC_4fn4-a1-m1-cD
14 4fn4-a1-m1-cB 254 49 0.3200 0.0630 0.3265 2.0 4fn4-a1-m1-cB_4fn4-a1-m1-cD
15 4fn4-a1-m1-cA 254 49 0.3200 0.0630 0.3265 2.0 4fn4-a1-m1-cA_4fn4-a1-m1-cD
16 5zm7-a1-m3-cA 366 28 0.2800 0.0383 0.5000 2.5 5zm7-a1-m2-cA_5zm7-a1-m3-cA
17 5zm7-a1-m2-cA 366 28 0.2800 0.0383 0.5000 2.5 5zm7-a1-m2-cA_5zm7-a1-m3-cA
18 5zm6-a1-m2-cA 392 28 0.2800 0.0357 0.5000 3.7 5zm6-a1-m2-cB_5zm6-a1-m2-cA
19 5zm6-a1-m2-cB 372 28 0.2800 0.0376 0.5000 4.5 5zm6-a1-m1-cB_5zm6-a1-m2-cB, 5zm6-a1-m2-cB_5zm6-a1-m2-cA
20 5zm6-a1-m1-cB 372 28 0.2800 0.0376 0.5000 4.5 5zm6-a1-m1-cB_5zm6-a1-m2-cB
21 5zm5-a1-m2-cA 393 28 0.2800 0.0356 0.5000 6.3 5zm5-a1-m1-cA_5zm5-a1-m2-cA
22 5zm5-a1-m1-cA 393 28 0.2800 0.0356 0.5000 6.3 5zm5-a1-m1-cA_5zm5-a1-m2-cA
23 5hvo-a4-m3-cC 454 32 0.2600 0.0286 0.4062 9.8 5hvo-a4-m3-cC_5hvo-a4-m3-cD
24 5hvo-a4-m1-cC 454 32 0.2600 0.0286 0.4062 9.8 5hvo-a4-m1-cC_5hvo-a4-m3-cD

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Reference:
Jacob Schwartz et al.

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