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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
SKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCDSDKDETGAYLIDRDPTYFGPVLNYLRH
GKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3drz-a1-m1-cE 97 97 1.0000 1.0000 1.0000 1.77e-68 3drz-a1-m1-cD_3drz-a1-m1-cE
2 3drz-a1-m1-cD 95 97 0.9794 1.0000 0.9794 5.74e-65 3drz-a1-m1-cD_3drz-a1-m1-cE
3 5bxh-a1-m1-cC 99 96 0.4948 0.4848 0.5000 3.66e-29 5bxh-a1-m1-cE_5bxh-a1-m1-cC
4 5bxh-a1-m1-cE 97 94 0.4948 0.4948 0.5106 5.36e-29 5bxh-a1-m1-cE_5bxh-a1-m1-cC
5 5fta-a1-m1-cB 101 92 0.3711 0.3564 0.3913 2.28e-12 5fta-a1-m1-cD_5fta-a1-m1-cB
6 5fta-a1-m1-cA 101 92 0.3711 0.3564 0.3913 2.28e-12 5fta-a1-m1-cD_5fta-a1-m1-cA
7 4zgc-a1-m1-cA 372 85 0.3711 0.0968 0.4235 4.99e-12 4zgc-a1-m1-cA_4zgc-a1-m1-cB
8 4zgc-a1-m1-cB 373 89 0.3711 0.0965 0.4045 8.39e-12 4zgc-a1-m1-cA_4zgc-a1-m1-cB
9 5fta-a1-m1-cC 97 91 0.3608 0.3608 0.3846 1.02e-11 5fta-a1-m1-cC_5fta-a1-m1-cD
10 5fta-a1-m1-cD 99 91 0.3608 0.3535 0.3846 1.02e-11 5fta-a1-m1-cC_5fta-a1-m1-cD, 5fta-a1-m1-cD_5fta-a1-m1-cA, 5fta-a1-m1-cD_5fta-a1-m1-cB
11 1nn7-a2-m5-cA 105 89 0.3299 0.3048 0.3596 4.07e-07 1nn7-a2-m1-cA_1nn7-a2-m5-cA
12 1nn7-a2-m1-cA 105 89 0.3299 0.3048 0.3596 4.07e-07 1nn7-a2-m1-cA_1nn7-a2-m5-cA
13 7f0j-a1-m1-cH 386 104 0.3711 0.0933 0.3462 5.81e-07 7f0j-a1-m1-cF_7f0j-a1-m1-cH
14 7f0j-a1-m1-cF 386 104 0.3711 0.0933 0.3462 5.81e-07 7f0j-a1-m1-cF_7f0j-a1-m1-cH
15 7ukh-a1-m1-cD 203 87 0.3299 0.1576 0.3678 8.02e-07 7ukh-a1-m1-cC_7ukh-a1-m1-cD
16 7ukh-a1-m1-cC 203 87 0.3299 0.1576 0.3678 8.02e-07 7ukh-a1-m1-cC_7ukh-a1-m1-cD
17 3kvt-a1-m4-cA 103 85 0.3093 0.2913 0.3529 1.02e-06 3kvt-a1-m2-cA_3kvt-a1-m4-cA
18 3kvt-a1-m2-cA 103 85 0.3093 0.2913 0.3529 1.02e-06 3kvt-a1-m2-cA_3kvt-a1-m4-cA
19 7re5-a1-m1-cA 108 95 0.2887 0.2593 0.2947 2.33e-06 7re5-a1-m1-cE_7re5-a1-m1-cA
20 7re5-a1-m1-cE 107 95 0.2887 0.2617 0.2947 2.42e-06 7re5-a1-m1-cE_7re5-a1-m1-cA
21 7pqu-a1-m1-cD 328 90 0.3093 0.0915 0.3333 1.08e-05 7pqu-a1-m1-cC_7pqu-a1-m1-cD
22 7pqu-a1-m1-cC 328 90 0.3093 0.0915 0.3333 1.08e-05 7pqu-a1-m1-cC_7pqu-a1-m1-cD
23 2i2r-a3-m1-cB 124 89 0.3299 0.2581 0.3596 1.50e-05 2i2r-a3-m1-cB_2i2r-a3-m1-cC
24 2i2r-a3-m1-cC 126 89 0.3299 0.2540 0.3596 1.53e-05 2i2r-a3-m1-cB_2i2r-a3-m1-cC
25 3cnf-a1-m9-cA 920 48 0.1546 0.0163 0.3125 2.0 3cnf-a1-m8-cA_3cnf-a1-m9-cA, 3cnf-a1-m9-cA_3cnf-a1-m9-cB
26 3cnf-a1-m8-cA 920 48 0.1546 0.0163 0.3125 2.0 3cnf-a1-m8-cA_3cnf-a1-m9-cA
27 3cnf-a1-m24-cA 920 48 0.1546 0.0163 0.3125 2.0 3cnf-a1-m24-cA_3cnf-a1-m9-cB
28 3cnf-a1-m10-cA 920 48 0.1546 0.0163 0.3125 2.0 3cnf-a1-m10-cA_3cnf-a1-m9-cB
29 3cnf-a1-m9-cB 924 48 0.1546 0.0162 0.3125 2.2 3cnf-a1-m10-cA_3cnf-a1-m9-cB, 3cnf-a1-m24-cA_3cnf-a1-m9-cB, 3cnf-a1-m54-cB_3cnf-a1-m9-cB, 3cnf-a1-m9-cA_3cnf-a1-m9-cB
30 3cnf-a1-m54-cB 924 48 0.1546 0.0162 0.3125 2.2 3cnf-a1-m54-cB_3cnf-a1-m9-cB
31 7ydx-a1-m2-cB 261 22 0.1134 0.0421 0.5000 9.6 7ydx-a1-m2-cB_7ydx-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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