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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
SLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGNHSQGGVARIKPAVIKY
LISHSFRFSEIKPGCLKVMLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fau-a3-m1-cB 81 81 1.0000 1.0000 1.0000 1.24e-55 3fau-a3-m1-cC_3fau-a3-m1-cB
2 3fau-a1-m1-cB 81 81 1.0000 1.0000 1.0000 1.24e-55 3fau-a1-m1-cD_3fau-a1-m1-cB
3 3fau-a1-m1-cD 79 81 0.9753 1.0000 0.9753 9.41e-52 3fau-a1-m1-cC_3fau-a1-m1-cD, 3fau-a1-m1-cD_3fau-a1-m1-cB
4 3fau-a3-m1-cC 77 80 0.9383 0.9870 0.9500 3.90e-49 3fau-a3-m1-cC_3fau-a3-m1-cB
5 3fau-a1-m1-cC 77 80 0.9383 0.9870 0.9500 3.90e-49 3fau-a1-m1-cC_3fau-a1-m1-cD
6 4b9w-a1-m1-cB 191 46 0.1728 0.0733 0.3043 0.27 4b9w-a1-m1-cB_4b9w-a1-m1-cA
7 3mgb-a1-m1-cB 264 31 0.1605 0.0492 0.4194 1.4 3mgb-a1-m1-cB_3mgb-a1-m1-cA
8 7zkk-a1-m4-cA 669 28 0.1358 0.0164 0.3929 2.7 7zkk-a1-m1-cA_7zkk-a1-m4-cA
9 7zkk-a1-m1-cA 669 28 0.1358 0.0164 0.3929 2.7 7zkk-a1-m1-cA_7zkk-a1-m4-cA
10 1tzj-a1-m1-cD 329 36 0.1605 0.0395 0.3611 3.5 1tzj-a1-m1-cD_1tzj-a1-m1-cC
11 2yy8-a1-m1-cA 174 26 0.1605 0.0747 0.5000 6.1 2yy8-a1-m1-cA_2yy8-a1-m1-cB
12 2yy8-a1-m1-cB 174 26 0.1605 0.0747 0.5000 6.2 2yy8-a1-m1-cA_2yy8-a1-m1-cB
13 1nx8-a1-m2-cA 248 24 0.1358 0.0444 0.4583 6.3 1nx8-a1-m2-cA_1nx8-a1-m1-cB
14 1nx8-a1-m1-cB 256 24 0.1358 0.0430 0.4583 6.6 1nx8-a1-m2-cA_1nx8-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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