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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
SLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKV
WEKPWLNFKELQEFKHVGD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4tx4-a1-m1-cA 83 79 1.0000 0.9518 1.0000 6.51e-54 4tx4-a1-m1-cB_4tx4-a1-m1-cA
2 4tx4-a1-m1-cB 79 79 1.0000 1.0000 1.0000 7.21e-54 4tx4-a1-m1-cB_4tx4-a1-m1-cA
3 6vlp-a1-m2-cA 80 77 0.7595 0.7500 0.7792 2.05e-41 6vlp-a1-m1-cA_6vlp-a1-m2-cA
4 6vlp-a1-m1-cA 80 77 0.7595 0.7500 0.7792 2.05e-41 6vlp-a1-m1-cA_6vlp-a1-m2-cA
5 5a0o-a1-m1-cS 93 90 0.7089 0.6022 0.6222 1.55e-29 5a0o-a1-m1-cB_5a0o-a1-m1-cS
6 5a0o-a1-m1-cB 93 90 0.7089 0.6022 0.6222 1.55e-29 5a0o-a1-m1-cB_5a0o-a1-m1-cS
7 5ohv-a1-m1-cB 89 88 0.7089 0.6292 0.6364 4.62e-29 5ohv-a1-m1-cB_5ohv-a1-m1-cD
8 5ohv-a1-m1-cD 90 88 0.7089 0.6222 0.6364 4.91e-29 5ohv-a1-m1-cB_5ohv-a1-m1-cD
9 5ohl-a4-m1-cE 89 88 0.6962 0.6180 0.6250 1.10e-28 5ohl-a4-m1-cB_5ohl-a4-m1-cE
10 5ohl-a4-m1-cB 89 88 0.6962 0.6180 0.6250 1.10e-28 5ohl-a4-m1-cB_5ohl-a4-m1-cE
11 3ul5-a1-m1-cA 82 78 0.5949 0.5732 0.6026 1.02e-26 3ul5-a1-m1-cB_3ul5-a1-m1-cA
12 3ul5-a1-m1-cB 81 78 0.5949 0.5802 0.6026 1.12e-26 3ul5-a1-m1-cB_3ul5-a1-m1-cA
13 7c03-a2-m2-cA 312 88 0.6076 0.1538 0.5455 3.81e-16 7c03-a2-m1-cA_7c03-a2-m2-cA
14 7c03-a2-m1-cA 312 88 0.6076 0.1538 0.5455 3.81e-16 7c03-a2-m1-cA_7c03-a2-m2-cA
15 5kux-a2-m2-cA 92 73 0.3544 0.3043 0.3836 6.44e-07 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 73 0.3544 0.3043 0.3836 6.44e-07 5kux-a2-m1-cA_5kux-a2-m2-cA
17 5k8r-a1-m2-cA 414 16 0.1266 0.0242 0.6250 6.8 5k8r-a1-m1-cA_5k8r-a1-m2-cA
18 5k8r-a1-m1-cA 414 16 0.1266 0.0242 0.6250 6.8 5k8r-a1-m1-cA_5k8r-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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