Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
SLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSCNKHNELTGDNVGPL
ILKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ooa-a2-m1-cD 64 64 1.0000 1.0000 1.0000 7.60e-43 4ooa-a2-m1-cC_4ooa-a2-m1-cD
2 4ooa-a2-m1-cC 64 64 1.0000 1.0000 1.0000 7.60e-43 4ooa-a2-m1-cC_4ooa-a2-m1-cD
3 4f1e-a8-m1-cP 63 63 0.6719 0.6825 0.6825 1.81e-27 4f1e-a8-m1-cO_4f1e-a8-m1-cP
4 4f1e-a8-m1-cO 62 61 0.6562 0.6774 0.6885 2.57e-26 4f1e-a8-m1-cO_4f1e-a8-m1-cP
5 3s2q-a2-m2-cB 65 62 0.5625 0.5538 0.5806 2.55e-20 3s2q-a2-m1-cA_3s2q-a2-m2-cB, 3s2q-a2-m2-cA_3s2q-a2-m2-cB
6 3s2q-a2-m2-cA 65 62 0.5625 0.5538 0.5806 2.55e-20 3s2q-a2-m2-cA_3s2q-a2-m2-cB
7 3s2q-a2-m1-cA 65 62 0.5625 0.5538 0.5806 2.55e-20 3s2q-a2-m1-cA_3s2q-a2-m2-cB
8 7yvz-a1-m2-cA 63 60 0.5312 0.5397 0.5667 9.77e-20 7yvz-a1-m1-cA_7yvz-a1-m2-cA
9 7yvz-a1-m1-cA 63 60 0.5312 0.5397 0.5667 9.77e-20 7yvz-a1-m1-cA_7yvz-a1-m2-cA
10 3p0s-a1-m9-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m54-cA_3p0s-a1-m9-cA, 3p0s-a1-m55-cA_3p0s-a1-m9-cA, 3p0s-a1-m8-cA_3p0s-a1-m9-cA
11 3p0s-a1-m8-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m8-cA_3p0s-a1-m9-cA
12 3p0s-a1-m55-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m55-cA_3p0s-a1-m9-cA
13 3p0s-a1-m54-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m54-cA_3p0s-a1-m9-cA
14 4ntc-a1-m1-cB 314 44 0.2031 0.0414 0.2955 4.5 4ntc-a1-m1-cB_4ntc-a1-m1-cA
15 4ntc-a1-m1-cA 325 44 0.2031 0.0400 0.2955 4.5 4ntc-a1-m1-cB_4ntc-a1-m1-cA
16 3ln3-a2-m2-cA 287 23 0.1406 0.0314 0.3913 5.2 3ln3-a2-m1-cA_3ln3-a2-m2-cA
17 3ln3-a2-m1-cA 287 23 0.1406 0.0314 0.3913 5.2 3ln3-a2-m1-cA_3ln3-a2-m2-cA
18 3tbo-a1-m2-cA 54 15 0.1250 0.1481 0.5333 8.6 3tbo-a1-m1-cA_3tbo-a1-m2-cA
19 3tbo-a1-m1-cA 54 15 0.1250 0.1481 0.5333 8.6 3tbo-a1-m1-cA_3tbo-a1-m2-cA
20 1z1c-a1-m9-cA 549 28 0.1562 0.0182 0.3571 8.7 1z1c-a1-m55-cA_1z1c-a1-m9-cA
21 1z1c-a1-m55-cA 549 28 0.1562 0.0182 0.3571 8.7 1z1c-a1-m55-cA_1z1c-a1-m9-cA
22 1y1l-a1-m1-cD 124 17 0.1250 0.0645 0.4706 8.7 1y1l-a1-m1-cA_1y1l-a1-m1-cD, 1y1l-a1-m1-cC_1y1l-a1-m1-cD
23 1y1l-a1-m1-cC 124 17 0.1250 0.0645 0.4706 8.7 1y1l-a1-m1-cC_1y1l-a1-m1-cD
24 1y1l-a1-m1-cA 124 17 0.1250 0.0645 0.4706 8.7 1y1l-a1-m1-cA_1y1l-a1-m1-cD
25 2xgk-a1-m9-cA 542 28 0.1562 0.0185 0.3571 9.3 2xgk-a1-m54-cA_2xgk-a1-m9-cA, 2xgk-a1-m8-cA_2xgk-a1-m9-cA
26 2xgk-a1-m8-cA 542 28 0.1562 0.0185 0.3571 9.3 2xgk-a1-m8-cA_2xgk-a1-m9-cA
27 2xgk-a1-m54-cA 542 28 0.1562 0.0185 0.3571 9.3 2xgk-a1-m54-cA_2xgk-a1-m9-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600