Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
SLINLKIQKENPKVVNEINIEDLSLTKAAYCRCWRSKTFPACDGSCNKHNELTGDNVGPL
ILKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ooa-a2-m1-cD 64 64 1.0000 1.0000 1.0000 7.60e-43 4ooa-a2-m1-cC_4ooa-a2-m1-cD
2 4ooa-a2-m1-cC 64 64 1.0000 1.0000 1.0000 7.60e-43 4ooa-a2-m1-cC_4ooa-a2-m1-cD
3 4f1e-a8-m1-cP 63 63 0.6719 0.6825 0.6825 1.81e-27 4f1e-a8-m1-cO_4f1e-a8-m1-cP
4 4f1e-a8-m1-cO 62 61 0.6562 0.6774 0.6885 2.57e-26 4f1e-a8-m1-cO_4f1e-a8-m1-cP
5 3s2q-a2-m2-cB 65 62 0.5625 0.5538 0.5806 2.55e-20 3s2q-a2-m1-cA_3s2q-a2-m2-cB, 3s2q-a2-m2-cA_3s2q-a2-m2-cB
6 3s2q-a2-m2-cA 65 62 0.5625 0.5538 0.5806 2.55e-20 3s2q-a2-m2-cA_3s2q-a2-m2-cB
7 3s2q-a2-m1-cA 65 62 0.5625 0.5538 0.5806 2.55e-20 3s2q-a2-m1-cA_3s2q-a2-m2-cB
8 7yvz-a1-m2-cA 63 60 0.5312 0.5397 0.5667 9.77e-20 7yvz-a1-m1-cA_7yvz-a1-m2-cA
9 7yvz-a1-m1-cA 63 60 0.5312 0.5397 0.5667 9.77e-20 7yvz-a1-m1-cA_7yvz-a1-m2-cA
10 3p0s-a1-m9-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m54-cA_3p0s-a1-m9-cA, 3p0s-a1-m55-cA_3p0s-a1-m9-cA, 3p0s-a1-m8-cA_3p0s-a1-m9-cA
11 3p0s-a1-m8-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m8-cA_3p0s-a1-m9-cA
12 3p0s-a1-m55-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m55-cA_3p0s-a1-m9-cA
13 3p0s-a1-m54-cA 412 49 0.2500 0.0388 0.3265 2.1 3p0s-a1-m54-cA_3p0s-a1-m9-cA
14 4ntc-a1-m1-cB 314 44 0.2031 0.0414 0.2955 4.5 4ntc-a1-m1-cB_4ntc-a1-m1-cA
15 4ntc-a1-m1-cA 325 44 0.2031 0.0400 0.2955 4.5 4ntc-a1-m1-cB_4ntc-a1-m1-cA
16 3ln3-a2-m2-cA 287 23 0.1406 0.0314 0.3913 5.2 3ln3-a2-m1-cA_3ln3-a2-m2-cA
17 3ln3-a2-m1-cA 287 23 0.1406 0.0314 0.3913 5.2 3ln3-a2-m1-cA_3ln3-a2-m2-cA
18 3tbo-a1-m2-cA 54 15 0.1250 0.1481 0.5333 8.6 3tbo-a1-m1-cA_3tbo-a1-m2-cA
19 3tbo-a1-m1-cA 54 15 0.1250 0.1481 0.5333 8.6 3tbo-a1-m1-cA_3tbo-a1-m2-cA
20 1z1c-a1-m9-cA 549 28 0.1562 0.0182 0.3571 8.7 1z1c-a1-m55-cA_1z1c-a1-m9-cA
21 1z1c-a1-m55-cA 549 28 0.1562 0.0182 0.3571 8.7 1z1c-a1-m55-cA_1z1c-a1-m9-cA
22 1y1l-a1-m1-cD 124 17 0.1250 0.0645 0.4706 8.7 1y1l-a1-m1-cA_1y1l-a1-m1-cD, 1y1l-a1-m1-cC_1y1l-a1-m1-cD
23 1y1l-a1-m1-cC 124 17 0.1250 0.0645 0.4706 8.7 1y1l-a1-m1-cC_1y1l-a1-m1-cD
24 1y1l-a1-m1-cA 124 17 0.1250 0.0645 0.4706 8.7 1y1l-a1-m1-cA_1y1l-a1-m1-cD
25 2xgk-a1-m9-cA 542 28 0.1562 0.0185 0.3571 9.3 2xgk-a1-m54-cA_2xgk-a1-m9-cA, 2xgk-a1-m8-cA_2xgk-a1-m9-cA
26 2xgk-a1-m8-cA 542 28 0.1562 0.0185 0.3571 9.3 2xgk-a1-m8-cA_2xgk-a1-m9-cA
27 2xgk-a1-m54-cA 542 28 0.1562 0.0185 0.3571 9.3 2xgk-a1-m54-cA_2xgk-a1-m9-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600