Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
SLIWGCELNEQNKTFEFKEHQLALRTVCLGDKAKDEFHIVEIVTEKSVPIATLKPSILPM
ATMVGIELTPPVTFRLKAGSGPLYISGQHV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1k5j-a1-m1-cD 90 90 1.0000 1.0000 1.0000 1.64e-63 1k5j-a1-m1-cC_1k5j-a1-m1-cD
2 1k5j-a1-m1-cC 89 90 0.9889 1.0000 0.9889 6.46e-61 1k5j-a1-m1-cC_1k5j-a1-m1-cD
3 3t30-a2-m1-cH 93 89 0.5222 0.5054 0.5281 1.03e-32 3t30-a2-m1-cI_3t30-a2-m1-cH
4 3t30-a2-m1-cI 92 89 0.5222 0.5109 0.5281 1.16e-30 3t30-a2-m1-cI_3t30-a2-m1-cH
5 1xe0-a2-m1-cJ 104 100 0.5556 0.4808 0.5000 8.05e-29 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
6 1xe0-a2-m1-cI 105 101 0.5556 0.4762 0.4950 1.16e-28 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
7 8as5-a1-m1-cE 97 97 0.5111 0.4742 0.4742 1.46e-20 8as5-a1-m1-cA_8as5-a1-m1-cE
8 8as5-a1-m1-cA 87 97 0.5000 0.5172 0.4639 7.35e-16 8as5-a1-m1-cA_8as5-a1-m1-cE
9 1nlq-a1-m1-cC 96 76 0.3222 0.3021 0.3816 8.76e-07 1nlq-a1-m1-cC_1nlq-a1-m1-cE
10 1nlq-a1-m1-cE 98 76 0.3222 0.2959 0.3816 1.00e-06 1nlq-a1-m1-cC_1nlq-a1-m1-cE
11 2p0k-a2-m3-cA 209 21 0.1111 0.0478 0.4762 7.3 2p0k-a2-m2-cA_2p0k-a2-m3-cA
12 2p0k-a2-m2-cA 209 21 0.1111 0.0478 0.4762 7.3 2p0k-a2-m2-cA_2p0k-a2-m3-cA
13 2imj-a2-m1-cC 153 30 0.1444 0.0850 0.4333 8.9 2imj-a2-m1-cD_2imj-a2-m1-cC
14 2imj-a2-m1-cD 151 30 0.1444 0.0861 0.4333 9.4 2imj-a2-m1-cD_2imj-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600