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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
SLIWGCELNEQNKTFEFKEHQLALRTVCLGDKAKDEFHIVEIVTKSVPIATLKPSILPMA
TMVGIELTPPVTFRLKAGSGPLYISGQHV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1k5j-a1-m1-cC 89 89 1.0000 1.0000 1.0000 8.45e-63 1k5j-a1-m1-cC_1k5j-a1-m1-cD
2 1k5j-a1-m1-cD 90 90 1.0000 0.9889 0.9889 6.38e-61 1k5j-a1-m1-cC_1k5j-a1-m1-cD
3 3t30-a2-m1-cI 92 89 0.5281 0.5109 0.5281 1.71e-32 3t30-a2-m1-cI_3t30-a2-m1-cH
4 3t30-a2-m1-cH 93 90 0.5281 0.5054 0.5222 4.72e-31 3t30-a2-m1-cI_3t30-a2-m1-cH
5 1xe0-a2-m1-cJ 104 100 0.5506 0.4712 0.4900 1.91e-29 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
6 1xe0-a2-m1-cI 105 101 0.5506 0.4667 0.4851 2.97e-29 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
7 8as5-a1-m1-cE 97 97 0.4944 0.4536 0.4536 1.34e-20 8as5-a1-m1-cA_8as5-a1-m1-cE
8 8as5-a1-m1-cA 87 97 0.4831 0.4943 0.4433 7.40e-16 8as5-a1-m1-cA_8as5-a1-m1-cE
9 1nlq-a1-m1-cC 96 76 0.3146 0.2917 0.3684 6.02e-06 1nlq-a1-m1-cC_1nlq-a1-m1-cE
10 1nlq-a1-m1-cE 98 76 0.3146 0.2857 0.3684 6.05e-06 1nlq-a1-m1-cC_1nlq-a1-m1-cE
11 4yfi-a1-m1-cA 268 46 0.1685 0.0560 0.3261 3.0 4yfi-a1-m1-cB_4yfi-a1-m1-cA
12 4yfi-a1-m1-cB 262 46 0.1685 0.0573 0.3261 3.2 4yfi-a1-m1-cB_4yfi-a1-m1-cA
13 2p0k-a2-m3-cA 209 61 0.1910 0.0813 0.2787 6.3 2p0k-a2-m2-cA_2p0k-a2-m3-cA
14 2p0k-a2-m2-cA 209 61 0.1910 0.0813 0.2787 6.3 2p0k-a2-m2-cA_2p0k-a2-m3-cA
15 5j6o-a1-m2-cA 278 29 0.1461 0.0468 0.4483 7.7 5j6o-a1-m1-cA_5j6o-a1-m2-cA
16 5j6o-a1-m1-cA 278 29 0.1461 0.0468 0.4483 7.7 5j6o-a1-m1-cA_5j6o-a1-m2-cA
17 2imj-a2-m1-cC 153 30 0.1461 0.0850 0.4333 8.1 2imj-a2-m1-cD_2imj-a2-m1-cC
18 2imj-a2-m1-cD 151 30 0.1461 0.0861 0.4333 8.3 2imj-a2-m1-cD_2imj-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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