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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
SLNEKLKIEHAKKKRLFDLYINGSYEVSELDSMMNDIDAQINYYEAQIEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5u96-a2-m1-cD 50 50 1.0000 1.0000 1.0000 9.94e-31 5u96-a2-m1-cC_5u96-a2-m1-cD
2 5u96-a1-m1-cA 50 50 1.0000 1.0000 1.0000 9.94e-31 5u96-a1-m1-cB_5u96-a1-m1-cA
3 5u96-a1-m1-cB 49 49 0.9800 1.0000 1.0000 4.78e-30 5u96-a1-m1-cB_5u96-a1-m1-cA
4 5u96-a2-m1-cC 46 46 0.9200 1.0000 1.0000 7.99e-28 5u96-a2-m1-cC_5u96-a2-m1-cD
5 7vqo-a1-m1-cD 1180 29 0.2200 0.0093 0.3793 2.8 7vqo-a1-m1-cA_7vqo-a1-m1-cD, 7vqo-a1-m1-cB_7vqo-a1-m1-cD, 7vqo-a1-m1-cC_7vqo-a1-m1-cD
6 7vqo-a1-m1-cC 1180 29 0.2200 0.0093 0.3793 2.8 7vqo-a1-m1-cC_7vqo-a1-m1-cD
7 7vqo-a1-m1-cB 1180 29 0.2200 0.0093 0.3793 2.8 7vqo-a1-m1-cB_7vqo-a1-m1-cD
8 7vqo-a1-m1-cA 1180 29 0.2200 0.0093 0.3793 2.8 7vqo-a1-m1-cA_7vqo-a1-m1-cD
9 4m9d-a1-m1-cA 417 44 0.2800 0.0336 0.3182 4.2 4m9d-a1-m1-cA_4m9d-a1-m1-cB
10 4m9d-a1-m1-cB 425 44 0.2800 0.0329 0.3182 4.6 4m9d-a1-m1-cA_4m9d-a1-m1-cB
11 3ppi-a1-m1-cC 253 16 0.1600 0.0316 0.5000 6.9 3ppi-a1-m1-cC_3ppi-a1-m1-cD
12 3ppi-a1-m1-cD 254 16 0.1600 0.0315 0.5000 6.9 3ppi-a1-m1-cC_3ppi-a1-m1-cD, 3ppi-a1-m1-cD_3ppi-a1-m1-cA, 3ppi-a1-m1-cD_3ppi-a1-m1-cB
13 3ppi-a1-m1-cB 258 16 0.1600 0.0310 0.5000 6.9 3ppi-a1-m1-cD_3ppi-a1-m1-cB
14 3ppi-a1-m1-cA 258 16 0.1600 0.0310 0.5000 6.9 3ppi-a1-m1-cD_3ppi-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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