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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
SLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILD
MIKGEMSNPGEVCSALNLCQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7p4t-a1-m1-cD 80 80 1.0000 1.0000 1.0000 1.10e-54 7p4t-a1-m1-cA_7p4t-a1-m1-cD, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
2 7p4t-a1-m1-cC 80 80 1.0000 1.0000 1.0000 1.10e-54 7p4t-a1-m1-cB_7p4t-a1-m1-cC, 7p4t-a1-m1-cC_7p4t-a1-m1-cD
3 7p4t-a1-m1-cB 80 80 1.0000 1.0000 1.0000 1.10e-54 7p4t-a1-m1-cB_7p4t-a1-m1-cC
4 7p4t-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.10e-54 7p4t-a1-m1-cA_7p4t-a1-m1-cD
5 5nxb-a1-m1-cD 80 80 1.0000 1.0000 1.0000 1.10e-54 5nxb-a1-m1-cC_5nxb-a1-m1-cD
6 5nxb-a1-m1-cC 80 80 1.0000 1.0000 1.0000 1.10e-54 5nxb-a1-m1-cC_5nxb-a1-m1-cD
7 2dob-a2-m2-cA 79 80 0.7750 0.7848 0.7750 1.52e-35 2dob-a2-m1-cA_2dob-a2-m2-cA
8 2dob-a2-m1-cA 79 80 0.7750 0.7848 0.7750 1.52e-35 2dob-a2-m1-cA_2dob-a2-m2-cA
9 2qyp-a1-m1-cA 78 76 0.4000 0.4103 0.4211 3.96e-11 2qyp-a1-m1-cA_2qyp-a1-m1-cB
10 2qyp-a1-m1-cB 81 76 0.4000 0.3951 0.4211 4.34e-11 2qyp-a1-m1-cA_2qyp-a1-m1-cB
11 6vyn-a3-m1-cD 78 76 0.3000 0.3077 0.3158 8.22e-11 6vyn-a3-m1-cD_6vyn-a3-m1-cF
12 6vyn-a3-m1-cF 79 76 0.3000 0.3038 0.3158 8.79e-11 6vyn-a3-m1-cD_6vyn-a3-m1-cF
13 5u85-a1-m1-cB 77 76 0.3500 0.3636 0.3684 2.49e-10 5u85-a1-m1-cB_5u85-a1-m1-cA
14 5u85-a1-m1-cA 78 76 0.3500 0.3590 0.3684 2.63e-10 5u85-a1-m1-cB_5u85-a1-m1-cA
15 7mbk-a1-m1-cA 77 76 0.2875 0.2987 0.3026 1.21e-08 7mbk-a1-m1-cA_7mbk-a1-m1-cB
16 7mbk-a1-m1-cB 82 76 0.2875 0.2805 0.3026 1.27e-08 7mbk-a1-m1-cA_7mbk-a1-m1-cB
17 2rb3-a2-m1-cC 79 76 0.3125 0.3165 0.3289 4.86e-08 2rb3-a2-m1-cB_2rb3-a2-m1-cC
18 2rb3-a2-m1-cB 79 76 0.3125 0.3165 0.3289 4.86e-08 2rb3-a2-m1-cB_2rb3-a2-m1-cC
19 3rfi-a2-m2-cA 80 33 0.1500 0.1500 0.3636 0.24 3rfi-a2-m1-cA_3rfi-a2-m2-cA
20 3rfi-a2-m1-cA 80 33 0.1500 0.1500 0.3636 0.24 3rfi-a2-m1-cA_3rfi-a2-m2-cA
21 1xfb-a3-m1-cL 342 41 0.1375 0.0322 0.2683 2.7 1xfb-a3-m1-cI_1xfb-a3-m1-cL, 1xfb-a3-m1-cK_1xfb-a3-m1-cL
22 1xfb-a3-m1-cK 342 41 0.1375 0.0322 0.2683 2.7 1xfb-a3-m1-cK_1xfb-a3-m1-cL
23 1xfb-a3-m1-cI 342 41 0.1375 0.0322 0.2683 2.7 1xfb-a3-m1-cI_1xfb-a3-m1-cL
24 4zb6-a2-m1-cD 220 17 0.1250 0.0455 0.5882 2.8 4zb6-a2-m1-cC_4zb6-a2-m1-cD
25 4zb6-a2-m1-cC 217 17 0.1250 0.0461 0.5882 3.1 4zb6-a2-m1-cC_4zb6-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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