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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
SLPSIRQLQNLIKQAAPVEIKLVTGDAITGRVLWQDPTCVCIADRQTTIWKQAIAYLQPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hfn-a1-m3-cB 60 60 1.0000 1.0000 1.0000 1.27e-38 3hfn-a1-m3-cA_3hfn-a1-m3-cB
2 3hfn-a1-m3-cA 60 60 1.0000 1.0000 1.0000 1.27e-38 3hfn-a1-m3-cA_3hfn-a1-m3-cB
3 3hfo-a1-m2-cC 66 63 0.5000 0.4545 0.4762 4.64e-14 3hfo-a1-m1-cB_3hfo-a1-m2-cC
4 3hfo-a1-m1-cB 66 63 0.5000 0.4545 0.4762 4.64e-14 3hfo-a1-m1-cB_3hfo-a1-m2-cC
5 7og8-a1-m6-cA 68 54 0.3000 0.2647 0.3333 0.074 7og8-a1-m2-cA_7og8-a1-m6-cA
6 7og8-a1-m2-cA 68 54 0.3000 0.2647 0.3333 0.074 7og8-a1-m2-cA_7og8-a1-m6-cA
7 2nlz-a1-m1-cD 537 50 0.2167 0.0242 0.2600 1.00 2nlz-a1-m1-cB_2nlz-a1-m1-cD, 2nlz-a1-m1-cC_2nlz-a1-m1-cD
8 2nlz-a1-m1-cC 535 50 0.2167 0.0243 0.2600 1.0 2nlz-a1-m1-cC_2nlz-a1-m1-cD
9 2nlz-a1-m1-cB 535 50 0.2167 0.0243 0.2600 1.0 2nlz-a1-m1-cB_2nlz-a1-m1-cD
10 7x05-a1-m1-cB 801 58 0.2500 0.0187 0.2586 3.2 7x05-a1-m1-cA_7x05-a1-m1-cB
11 7x05-a1-m1-cA 801 58 0.2500 0.0187 0.2586 3.2 7x05-a1-m1-cA_7x05-a1-m1-cB
12 3c0u-a1-m1-cB 177 50 0.2167 0.0734 0.2600 4.0 3c0u-a1-m1-cA_3c0u-a1-m1-cB
13 3c0u-a1-m1-cA 174 50 0.2167 0.0747 0.2600 4.0 3c0u-a1-m1-cA_3c0u-a1-m1-cB
14 4zdn-a1-m2-cA 583 25 0.1667 0.0172 0.4000 7.6 4zdn-a1-m1-cA_4zdn-a1-m2-cA
15 4zdn-a1-m1-cA 583 25 0.1667 0.0172 0.4000 7.6 4zdn-a1-m1-cA_4zdn-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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