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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
SLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS
RPVS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hk9-a1-m1-cA 64 64 1.0000 1.0000 1.0000 1.24e-41 1hk9-a1-m1-cB_1hk9-a1-m1-cA
2 1hk9-a1-m1-cB 63 63 0.9844 1.0000 1.0000 4.70e-41 1hk9-a1-m1-cB_1hk9-a1-m1-cA
3 6xyj-a1-m1-cCCC 79 76 0.9375 0.7595 0.7895 1.21e-35 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
4 6xyj-a1-m1-cDDD 80 76 0.9375 0.7500 0.7895 1.36e-35 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
5 7og8-a1-m6-cA 68 64 0.8125 0.7647 0.8125 5.19e-34 7og8-a1-m2-cA_7og8-a1-m6-cA
6 7og8-a1-m2-cA 68 64 0.8125 0.7647 0.8125 5.19e-34 7og8-a1-m2-cA_7og8-a1-m6-cA
7 3ahu-a1-m1-cC 66 64 0.4531 0.4394 0.4531 1.20e-17 3ahu-a1-m1-cA_3ahu-a1-m1-cC
8 3ahu-a1-m1-cA 66 64 0.4531 0.4394 0.4531 1.20e-17 3ahu-a1-m1-cA_3ahu-a1-m1-cC
9 1ycy-a2-m2-cD 60 46 0.2500 0.2667 0.3478 0.31 1ycy-a2-m2-cC_1ycy-a2-m2-cD
10 1ycy-a2-m2-cC 60 46 0.2500 0.2667 0.3478 0.31 1ycy-a2-m2-cC_1ycy-a2-m2-cD
11 1ycy-a1-m4-cD 60 46 0.2500 0.2667 0.3478 0.31 1ycy-a1-m2-cC_1ycy-a1-m4-cD
12 1ycy-a1-m2-cC 60 46 0.2500 0.2667 0.3478 0.31 1ycy-a1-m2-cC_1ycy-a1-m4-cD
13 1dk5-a4-m1-cB 314 28 0.1719 0.0350 0.3929 2.7 1dk5-a4-m1-cB_1dk5-a4-m3-cA
14 1dk5-a3-m1-cB 314 28 0.1719 0.0350 0.3929 2.7 1dk5-a3-m1-cB_1dk5-a3-m2-cA
15 1dk5-a4-m3-cA 316 28 0.1719 0.0348 0.3929 2.7 1dk5-a4-m1-cB_1dk5-a4-m3-cA
16 1dk5-a3-m2-cA 316 28 0.1719 0.0348 0.3929 2.7 1dk5-a3-m1-cB_1dk5-a3-m2-cA
17 5a0u-a5-m2-cE 793 31 0.1562 0.0126 0.3226 5.7 5a0u-a5-m1-cF_5a0u-a5-m2-cE
18 5a0u-a5-m1-cF 793 31 0.1562 0.0126 0.3226 5.7 5a0u-a5-m1-cF_5a0u-a5-m2-cE
19 5iqq-a1-m1-cC 83 28 0.1875 0.1446 0.4286 6.3 5iqq-a1-m1-cD_5iqq-a1-m1-cC
20 5iqq-a1-m1-cD 81 28 0.1875 0.1481 0.4286 6.7 5iqq-a1-m1-cD_5iqq-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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