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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
SLTDAKIRTLKPSDKPFKVSDSHGLYLLVKPGGSRHWYLKYRISGKESRIALGAYPAISL
SDARQQREGIRKMLALN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3jtz-a1-m2-cA 77 77 1.0000 1.0000 1.0000 6.30e-52 3jtz-a1-m1-cA_3jtz-a1-m2-cA
2 3jtz-a1-m1-cA 77 77 1.0000 1.0000 1.0000 6.30e-52 3jtz-a1-m1-cA_3jtz-a1-m2-cA
3 6g84-a1-m2-cA 356 46 0.2468 0.0534 0.4130 0.076 6g84-a1-m2-cA_6g84-a1-m2-cB
4 6g84-a1-m1-cA 356 46 0.2468 0.0534 0.4130 0.076 6g84-a1-m1-cA_6g84-a1-m2-cB
5 6g84-a1-m2-cB 368 46 0.2468 0.0516 0.4130 0.076 6g84-a1-m1-cA_6g84-a1-m2-cB, 6g84-a1-m1-cB_6g84-a1-m2-cB, 6g84-a1-m2-cA_6g84-a1-m2-cB
6 6g84-a1-m1-cB 368 46 0.2468 0.0516 0.4130 0.076 6g84-a1-m1-cB_6g84-a1-m2-cB
7 2wp0-a1-m2-cB 180 19 0.1299 0.0556 0.5263 1.7 2wp0-a1-m1-cA_2wp0-a1-m2-cB, 2wp0-a1-m2-cA_2wp0-a1-m2-cB
8 2wp0-a1-m2-cA 180 19 0.1299 0.0556 0.5263 1.7 2wp0-a1-m2-cA_2wp0-a1-m2-cB
9 2wp0-a1-m1-cA 180 19 0.1299 0.0556 0.5263 1.7 2wp0-a1-m1-cA_2wp0-a1-m2-cB
10 6dxb-a2-m1-cD 387 27 0.1169 0.0233 0.3333 6.3 6dxb-a2-m1-cD_6dxb-a2-m1-cB
11 6dxb-a2-m1-cB 388 27 0.1169 0.0232 0.3333 6.4 6dxb-a2-m1-cD_6dxb-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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