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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
SLTQEQLEDARRLKAIWEKKKNELGLSYESVADKMGMGQSAVAALFNGINALNAYNAALL
AKILKVSVEEFSPSIAREIR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3kz3-a1-m1-cB 80 80 1.0000 1.0000 1.0000 5.41e-53 3kz3-a1-m1-cA_3kz3-a1-m1-cB
2 3kz3-a1-m1-cA 80 80 1.0000 1.0000 1.0000 5.41e-53 3kz3-a1-m1-cA_3kz3-a1-m1-cB
3 1lmb-a1-m1-c4 92 78 0.9250 0.8043 0.9487 3.20e-48 1lmb-a1-m1-c3_1lmb-a1-m1-c4
4 1lrp-a2-m1-cC 89 78 0.9250 0.8315 0.9487 4.53e-48 1lrp-a2-m1-cB_1lrp-a2-m1-cC
5 1lrp-a2-m1-cB 89 78 0.9250 0.8315 0.9487 4.53e-48 1lrp-a2-m1-cB_1lrp-a2-m1-cC
6 1lmb-a1-m1-c3 87 78 0.9250 0.8506 0.9487 4.82e-48 1lmb-a1-m1-c3_1lmb-a1-m1-c4
7 7jvt-a1-m2-cD 199 78 0.9250 0.3719 0.9487 1.62e-46 7jvt-a1-m1-cD_7jvt-a1-m2-cD
8 7jvt-a1-m1-cD 199 78 0.9250 0.3719 0.9487 1.62e-46 7jvt-a1-m1-cD_7jvt-a1-m2-cD
9 3bdn-a1-m1-cB 234 79 0.9250 0.3162 0.9367 3.70e-46 3bdn-a1-m1-cA_3bdn-a1-m1-cB
10 3bdn-a1-m1-cA 234 79 0.9250 0.3162 0.9367 3.70e-46 3bdn-a1-m1-cA_3bdn-a1-m1-cB
11 6sgy-a1-m1-cB 402 51 0.1875 0.0373 0.2941 0.11 6sgy-a1-m1-cA_6sgy-a1-m1-cB
12 6sgy-a1-m1-cA 402 51 0.1875 0.0373 0.2941 0.11 6sgy-a1-m1-cA_6sgy-a1-m1-cB
13 2bji-a1-m1-cB 274 29 0.1500 0.0438 0.4138 3.0 2bji-a1-m1-cA_2bji-a1-m1-cB
14 2bji-a1-m1-cA 274 29 0.1500 0.0438 0.4138 3.0 2bji-a1-m1-cA_2bji-a1-m1-cB
15 4as5-a2-m1-cD 274 29 0.1500 0.0438 0.4138 3.9 4as5-a2-m1-cC_4as5-a2-m1-cD
16 4as5-a2-m1-cC 274 29 0.1500 0.0438 0.4138 3.9 4as5-a2-m1-cC_4as5-a2-m1-cD
17 6f35-a1-m1-cB 400 38 0.2000 0.0400 0.4211 7.0 6f35-a1-m1-cA_6f35-a1-m1-cB
18 6f35-a1-m1-cA 400 38 0.2000 0.0400 0.4211 7.0 6f35-a1-m1-cA_6f35-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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