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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
SLVEATLEVIGGKWKVILHLTHGKKRTSELKRLPNITQKLTQQLRELEADGVINRIVYNQ
KVEYELSEYGRSLEGILDLAWGANHINR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hzt-a2-m1-cD 88 88 1.0000 1.0000 1.0000 1.42e-59 2hzt-a2-m1-cC_2hzt-a2-m1-cD
2 2hzt-a2-m1-cC 88 88 1.0000 1.0000 1.0000 1.42e-59 2hzt-a2-m1-cC_2hzt-a2-m1-cD
3 4a5m-a3-m1-cE 96 82 0.5682 0.5208 0.6098 2.53e-24 4a5m-a3-m1-cE_4a5m-a3-m1-cF
4 4a5m-a3-m1-cF 97 82 0.5682 0.5155 0.6098 2.66e-24 4a5m-a3-m1-cE_4a5m-a3-m1-cF
5 7bzg-a3-m1-cJ 110 93 0.5341 0.4273 0.5054 2.88e-16 7bzg-a3-m1-cI_7bzg-a3-m1-cJ
6 7bzg-a3-m1-cI 110 93 0.5341 0.4273 0.5054 2.88e-16 7bzg-a3-m1-cI_7bzg-a3-m1-cJ
7 7bze-a1-m2-cA 108 93 0.5341 0.4352 0.5054 3.13e-16 7bze-a1-m1-cA_7bze-a1-m2-cA
8 7bze-a1-m1-cA 108 93 0.5341 0.4352 0.5054 3.13e-16 7bze-a1-m1-cA_7bze-a1-m2-cA
9 1z7u-a1-m1-cA 107 87 0.4091 0.3364 0.4138 3.71e-09 1z7u-a1-m1-cB_1z7u-a1-m1-cA
10 1z7u-a1-m1-cB 106 87 0.4091 0.3396 0.4138 4.05e-09 1z7u-a1-m1-cB_1z7u-a1-m1-cA
11 2fsw-a1-m1-cA 99 77 0.2841 0.2525 0.3247 3.90e-05 2fsw-a1-m1-cA_2fsw-a1-m1-cB
12 2fsw-a1-m1-cB 100 77 0.2841 0.2500 0.3247 4.37e-05 2fsw-a1-m1-cA_2fsw-a1-m1-cB
13 1yyv-a1-m1-cB 107 80 0.2955 0.2430 0.3250 6.12e-05 1yyv-a1-m1-cB_1yyv-a1-m1-cA
14 1yyv-a1-m1-cA 109 80 0.2955 0.2385 0.3250 6.73e-05 1yyv-a1-m1-cB_1yyv-a1-m1-cA
15 6o8l-a1-m2-cA 92 58 0.1818 0.1739 0.2759 0.33 6o8l-a1-m1-cA_6o8l-a1-m2-cA
16 6o8l-a1-m1-cA 92 58 0.1818 0.1739 0.2759 0.33 6o8l-a1-m1-cA_6o8l-a1-m2-cA
17 7ctc-a1-m1-cD 359 35 0.1364 0.0334 0.3429 3.8 7ctc-a1-m1-cA_7ctc-a1-m1-cD
18 7ctc-a1-m1-cA 359 35 0.1364 0.0334 0.3429 3.8 7ctc-a1-m1-cA_7ctc-a1-m1-cD
19 2hre-a3-m2-cD 359 35 0.1364 0.0334 0.3429 3.8 2hre-a3-m1-cB_2hre-a3-m2-cD
20 2hre-a3-m1-cB 359 35 0.1364 0.0334 0.3429 3.8 2hre-a3-m1-cB_2hre-a3-m2-cD
21 7dus-a1-m2-cA 130 21 0.1250 0.0846 0.5238 9.4 7dus-a1-m1-cA_7dus-a1-m2-cA
22 7dus-a1-m1-cA 130 21 0.1250 0.0846 0.5238 9.4 7dus-a1-m1-cA_7dus-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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