Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
SLYRVLILNDDYTPAEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVAETKV
AQVIDSARRHQHPLQCTMEKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3g1b-a1-m1-cB 81 81 1.0000 1.0000 1.0000 1.60e-57 3g1b-a1-m1-cA_3g1b-a1-m1-cB
2 3g1b-a1-m1-cA 80 80 0.9877 1.0000 1.0000 7.81e-57 3g1b-a1-m1-cA_3g1b-a1-m1-cB
3 3o2o-a7-m1-cH 85 80 0.5679 0.5412 0.5750 5.33e-30 3o2o-a7-m1-cG_3o2o-a7-m1-cH
4 3o2o-a7-m1-cG 85 80 0.5679 0.5412 0.5750 5.33e-30 3o2o-a7-m1-cG_3o2o-a7-m1-cH
5 3o2o-a6-m1-cG 85 80 0.5679 0.5412 0.5750 5.33e-30 3o2o-a6-m1-cF_3o2o-a6-m1-cG
6 3o2o-a6-m1-cF 85 80 0.5679 0.5412 0.5750 5.33e-30 3o2o-a6-m1-cF_3o2o-a6-m1-cG
7 4yjm-a5-m2-cC 83 81 0.3951 0.3855 0.3951 6.68e-16 4yjm-a5-m2-cC_4yjm-a5-m3-cA
8 4yjm-a5-m1-cB 84 81 0.3951 0.3810 0.3951 7.08e-16 4yjm-a5-m1-cB_4yjm-a5-m3-cA
9 4yjm-a5-m3-cA 85 81 0.3951 0.3765 0.3951 7.42e-16 4yjm-a5-m1-cB_4yjm-a5-m3-cA, 4yjm-a5-m2-cC_4yjm-a5-m3-cA
10 7d34-a1-m1-cB 79 62 0.2593 0.2658 0.3387 0.003 7d34-a1-m1-cA_7d34-a1-m1-cB
11 7d34-a1-m1-cA 79 62 0.2593 0.2658 0.3387 0.003 7d34-a1-m1-cA_7d34-a1-m1-cB
12 4en4-a1-m1-cB 310 80 0.2469 0.0645 0.2500 1.9 4en4-a1-m1-cA_4en4-a1-m1-cB
13 4en4-a1-m1-cA 310 80 0.2469 0.0645 0.2500 1.9 4en4-a1-m1-cA_4en4-a1-m1-cB
14 2yxt-a2-m2-cB 304 80 0.2469 0.0658 0.2500 2.1 2yxt-a2-m1-cB_2yxt-a2-m2-cB
15 2yxt-a2-m1-cB 304 80 0.2469 0.0658 0.2500 2.1 2yxt-a2-m1-cB_2yxt-a2-m2-cB
16 5b7y-a1-m1-cA 269 50 0.2099 0.0632 0.3400 3.9 5b7y-a1-m1-cB_5b7y-a1-m1-cA
17 5b7y-a1-m1-cB 268 50 0.2099 0.0634 0.3400 4.0 5b7y-a1-m1-cB_5b7y-a1-m1-cA
18 2zvr-a1-m1-cA 259 50 0.2099 0.0656 0.3400 4.1 2zvr-a1-m1-cA_2zvr-a1-m1-cB
19 2zvr-a1-m1-cB 262 50 0.2099 0.0649 0.3400 4.4 2zvr-a1-m1-cA_2zvr-a1-m1-cB
20 6j9f-a1-m1-cA 215 39 0.1235 0.0465 0.2564 8.3 6j9f-a1-m1-cB_6j9f-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600