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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=26)
SMATNFDILKRLSNLEKHVFGSKLYD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5an5-a2-m1-cD 26 26 1.0000 1.0000 1.0000 2.99e-13 5an5-a2-m1-cJ_5an5-a2-m1-cD
2 5an5-a2-m1-cJ 24 24 0.9231 1.0000 1.0000 9.38e-12 5an5-a2-m1-cJ_5an5-a2-m1-cD
3 5an5-a3-m1-cE 23 23 0.8846 1.0000 1.0000 6.67e-11 5an5-a3-m1-cG_5an5-a3-m1-cE
4 5an5-a1-m1-cI 23 22 0.8462 0.9565 1.0000 4.76e-10 5an5-a1-m1-cB_5an5-a1-m1-cI
5 5an5-a1-m1-cB 21 21 0.8077 1.0000 1.0000 1.89e-09 5an5-a1-m1-cB_5an5-a1-m1-cI
6 5an5-a3-m1-cG 17 17 0.6538 1.0000 1.0000 2.67e-06 5an5-a3-m1-cG_5an5-a3-m1-cE
7 3vnj-a1-m1-cD 289 19 0.3846 0.0346 0.5263 0.69 3vnj-a1-m1-cB_3vnj-a1-m1-cD
8 3vni-a1-m1-cA 289 19 0.3846 0.0346 0.5263 0.69 3vni-a1-m1-cD_3vni-a1-m1-cA
9 3vnj-a1-m1-cB 288 19 0.3846 0.0347 0.5263 0.70 3vnj-a1-m1-cB_3vnj-a1-m1-cD
10 3vni-a1-m1-cD 288 19 0.3846 0.0347 0.5263 0.70 3vni-a1-m1-cC_3vni-a1-m1-cD, 3vni-a1-m1-cD_3vni-a1-m1-cA
11 3vni-a1-m1-cC 288 19 0.3846 0.0347 0.5263 0.70 3vni-a1-m1-cC_3vni-a1-m1-cD
12 7x7w-a1-m2-cB 288 19 0.3077 0.0278 0.4211 4.6 7x7w-a1-m1-cA_7x7w-a1-m2-cB
13 7x7w-a1-m1-cA 288 19 0.3077 0.0278 0.4211 4.6 7x7w-a1-m1-cA_7x7w-a1-m2-cB
14 2jis-a1-m1-cA 478 19 0.3846 0.0209 0.5263 5.4 2jis-a1-m1-cA_2jis-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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