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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
SMDRRKAATMRERRRLKKVNQAFETLKRCTTTNPNQRLPKVEILRNAIRYIESLQE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7z5k-a1-m1-cA 56 56 1.0000 1.0000 1.0000 3.00e-35 7z5k-a1-m1-cA_7z5k-a1-m1-cB
2 7z5k-a1-m1-cB 56 55 0.9821 0.9821 1.0000 1.84e-34 7z5k-a1-m1-cA_7z5k-a1-m1-cB
3 1mdy-a2-m1-cD 62 53 0.8393 0.7581 0.8868 4.99e-29 1mdy-a2-m1-cC_1mdy-a2-m1-cD
4 1mdy-a2-m1-cC 62 53 0.8393 0.7581 0.8868 4.99e-29 1mdy-a2-m1-cC_1mdy-a2-m1-cD
5 2ql2-a3-m1-cB 59 55 0.3750 0.3559 0.3818 1.85e-04 2ql2-a3-m1-cD_2ql2-a3-m1-cB
6 2ql2-a3-m1-cD 57 54 0.3750 0.3684 0.3889 2.36e-04 2ql2-a3-m1-cD_2ql2-a3-m1-cB
7 6od5-a1-m1-cB 60 55 0.3571 0.3333 0.3636 0.008 6od5-a1-m1-cB_6od5-a1-m1-cA
8 6od5-a1-m1-cA 62 55 0.3571 0.3226 0.3636 0.009 6od5-a1-m1-cB_6od5-a1-m1-cA
9 6u2u-a1-m1-cB 44 41 0.3036 0.3864 0.4146 0.010 6u2u-a1-m1-cB_6u2u-a1-m1-cA
10 6u2u-a1-m1-cA 46 41 0.3036 0.3696 0.4146 0.011 6u2u-a1-m1-cB_6u2u-a1-m1-cA
11 6od3-a4-m1-cI 59 54 0.3393 0.3220 0.3519 0.038 6od3-a4-m1-cJ_6od3-a4-m1-cI
12 6od3-a4-m1-cJ 52 47 0.2857 0.3077 0.3404 0.38 6od3-a4-m1-cJ_6od3-a4-m1-cI
13 5gnj-a2-m1-cA 74 45 0.3036 0.2297 0.3778 0.49 5gnj-a2-m1-cA_5gnj-a2-m1-cB
14 5gnj-a2-m1-cB 77 45 0.3036 0.2208 0.3778 0.64 5gnj-a2-m1-cA_5gnj-a2-m1-cB
15 1r05-a1-m1-cB 87 52 0.2143 0.1379 0.2308 0.71 1r05-a1-m1-cA_1r05-a1-m1-cB
16 1r05-a1-m1-cA 87 52 0.2143 0.1379 0.2308 0.71 1r05-a1-m1-cA_1r05-a1-m1-cB
17 5eyo-a2-m2-cC 88 52 0.2143 0.1364 0.2308 0.96 5eyo-a2-m1-cC_5eyo-a2-m2-cC
18 5eyo-a2-m1-cC 88 52 0.2143 0.1364 0.2308 0.96 5eyo-a2-m1-cC_5eyo-a2-m2-cC
19 4tr2-a3-m1-cB 474 27 0.2679 0.0316 0.5556 3.3 4tr2-a3-m1-cA_4tr2-a3-m1-cB
20 4tr2-a3-m1-cA 471 27 0.2679 0.0318 0.5556 3.3 4tr2-a3-m1-cA_4tr2-a3-m1-cB
21 6sl3-a1-m2-cA 618 30 0.2321 0.0210 0.4333 3.4 6sl3-a1-m1-cA_6sl3-a1-m2-cA
22 6sl3-a1-m1-cA 618 30 0.2321 0.0210 0.4333 3.4 6sl3-a1-m1-cA_6sl3-a1-m2-cA
23 6sl2-a1-m2-cA 606 30 0.2321 0.0215 0.4333 3.6 6sl2-a1-m1-cA_6sl2-a1-m2-cA
24 6sl2-a1-m1-cA 606 30 0.2321 0.0215 0.4333 3.6 6sl2-a1-m1-cA_6sl2-a1-m2-cA
25 6at7-a3-m2-cB 671 46 0.1964 0.0164 0.2391 7.8 6at7-a3-m2-cB_6at7-a3-m1-cA
26 6at7-a2-m2-cB 671 46 0.1964 0.0164 0.2391 7.8 6at7-a2-m1-cB_6at7-a2-m2-cB, 6at7-a2-m2-cB_6at7-a2-m2-cA
27 6at7-a2-m1-cB 671 46 0.1964 0.0164 0.2391 7.8 6at7-a2-m1-cB_6at7-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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