Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
SMDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4nr2-a3-m1-cE 51 51 1.0000 1.0000 1.0000 2.21e-31 4nr2-a3-m1-cF_4nr2-a3-m1-cE
2 2jo8-a1-m1-cB 51 49 0.9608 0.9608 1.0000 6.23e-30 2jo8-a1-m1-cA_2jo8-a1-m1-cB
3 2jo8-a1-m1-cA 51 49 0.9608 0.9608 1.0000 6.23e-30 2jo8-a1-m1-cA_2jo8-a1-m1-cB
4 4nr2-a3-m1-cF 47 47 0.9216 1.0000 1.0000 6.27e-28 4nr2-a3-m1-cF_4nr2-a3-m1-cE
5 6bn1-a2-m3-cA 54 49 0.5098 0.4815 0.5306 2.70e-13 6bn1-a2-m1-cA_6bn1-a2-m3-cA
6 6bn1-a2-m1-cA 54 49 0.5098 0.4815 0.5306 2.70e-13 6bn1-a2-m1-cA_6bn1-a2-m3-cA
7 4hkd-a1-m1-cB 48 45 0.5686 0.6042 0.6444 1.78e-12 4hkd-a1-m1-cA_4hkd-a1-m1-cB
8 4hkd-a1-m1-cA 46 45 0.5686 0.6304 0.6444 2.27e-12 4hkd-a1-m1-cA_4hkd-a1-m1-cB
9 6bxn-a1-m1-cB 316 26 0.1765 0.0285 0.3462 2.9 6bxn-a1-m1-cA_6bxn-a1-m1-cB
10 3tdi-a3-m1-cB 200 48 0.2549 0.0650 0.2708 3.8 3tdi-a3-m1-cB_3tdi-a3-m1-cA
11 3aow-a1-m1-cC 404 24 0.1961 0.0248 0.4167 4.1 3aow-a1-m1-cA_3aow-a1-m1-cC
12 3aow-a1-m1-cA 404 24 0.1961 0.0248 0.4167 4.1 3aow-a1-m1-cA_3aow-a1-m1-cC
13 3tdi-a3-m1-cA 202 48 0.2549 0.0644 0.2708 4.2 3tdi-a3-m1-cB_3tdi-a3-m1-cA
14 3fe3-a1-m1-cB 317 28 0.2157 0.0347 0.3929 4.5 3fe3-a1-m1-cA_3fe3-a1-m1-cB
15 3fe3-a1-m1-cA 317 28 0.2157 0.0347 0.3929 4.5 3fe3-a1-m1-cA_3fe3-a1-m1-cB
16 2e50-a2-m1-cP 186 34 0.1961 0.0538 0.2941 6.9 2e50-a2-m1-cQ_2e50-a2-m1-cP
17 7mto-a1-m2-cA 188 34 0.1961 0.0532 0.2941 8.1 7mto-a1-m1-cA_7mto-a1-m2-cA
18 7mto-a1-m1-cA 188 34 0.1961 0.0532 0.2941 8.1 7mto-a1-m1-cA_7mto-a1-m2-cA
19 2q2e-a1-m2-cB 581 29 0.1765 0.0155 0.3103 9.0 2q2e-a1-m1-cB_2q2e-a1-m2-cB
20 2q2e-a1-m1-cB 581 29 0.1765 0.0155 0.3103 9.0 2q2e-a1-m1-cB_2q2e-a1-m2-cB
21 2e50-a2-m1-cQ 159 34 0.1961 0.0629 0.2941 9.6 2e50-a2-m1-cQ_2e50-a2-m1-cP

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600