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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
SMGFLILSRREGEGITLSLKADYPAEELIRQLREGGIRILVTDIIGNQARVGIEAPRGVL
IVRDELK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4krw-a1-m2-cA 67 67 1.0000 1.0000 1.0000 2.01e-41 4krw-a1-m1-cA_4krw-a1-m2-cA
2 4krw-a1-m1-cA 67 67 1.0000 1.0000 1.0000 2.01e-41 4krw-a1-m1-cA_4krw-a1-m2-cA
3 7yr6-a1-m1-cE 55 63 0.3134 0.3818 0.3333 0.014 7yr6-a1-m1-cD_7yr6-a1-m1-cE
4 7yr6-a1-m1-cD 55 63 0.3134 0.3818 0.3333 0.014 7yr6-a1-m1-cD_7yr6-a1-m1-cE
5 2bti-a1-m1-cB 55 64 0.3134 0.3818 0.3281 0.034 2bti-a1-m1-cB_2bti-a1-m1-cA
6 1y00-a1-m1-cB 61 63 0.2687 0.2951 0.2857 0.056 1y00-a1-m1-cA_1y00-a1-m1-cB
7 1y00-a1-m1-cA 61 63 0.2687 0.2951 0.2857 0.056 1y00-a1-m1-cA_1y00-a1-m1-cB
8 2mf0-a1-m1-cB 59 63 0.2836 0.3220 0.3016 0.058 2mf0-a1-m1-cA_2mf0-a1-m1-cB
9 2mf0-a1-m1-cA 59 63 0.2836 0.3220 0.3016 0.058 2mf0-a1-m1-cA_2mf0-a1-m1-cB
10 2bti-a1-m1-cA 56 30 0.1642 0.1964 0.3667 0.096 2bti-a1-m1-cB_2bti-a1-m1-cA
11 3tdc-a2-m2-cA 720 30 0.1940 0.0181 0.4333 2.9 3tdc-a2-m1-cA_3tdc-a2-m2-cA
12 3tdc-a2-m1-cA 720 30 0.1940 0.0181 0.4333 2.9 3tdc-a2-m1-cA_3tdc-a2-m2-cA
13 4iqg-a1-m1-cC 243 37 0.1642 0.0453 0.2973 5.8 4iqg-a1-m1-cC_4iqg-a1-m1-cD
14 4iqg-a1-m1-cB 243 37 0.1642 0.0453 0.2973 5.8 4iqg-a1-m1-cB_4iqg-a1-m1-cD
15 4iqg-a1-m1-cD 244 37 0.1642 0.0451 0.2973 6.0 4iqg-a1-m1-cB_4iqg-a1-m1-cD, 4iqg-a1-m1-cC_4iqg-a1-m1-cD
16 1auo-a1-m1-cB 218 39 0.2239 0.0688 0.3846 6.7 1auo-a1-m1-cA_1auo-a1-m1-cB
17 1auo-a1-m1-cA 218 39 0.2239 0.0688 0.3846 6.7 1auo-a1-m1-cA_1auo-a1-m1-cB
18 4trh-a1-m1-cB 508 19 0.1642 0.0217 0.5789 7.2 4trh-a1-m1-cB_4trh-a1-m1-cA
19 4trh-a1-m1-cA 509 19 0.1642 0.0216 0.5789 7.2 4trh-a1-m1-cB_4trh-a1-m1-cA
20 2zg6-a1-m1-cA 198 16 0.1194 0.0404 0.5000 7.5 2zg6-a1-m1-cA_2zg6-a1-m1-cB
21 2zg6-a1-m1-cB 199 16 0.1194 0.0402 0.5000 7.6 2zg6-a1-m1-cA_2zg6-a1-m1-cB
22 1k1y-a3-m1-cB 636 33 0.1791 0.0189 0.3636 8.5 1k1y-a3-m1-cA_1k1y-a3-m1-cB
23 1k1y-a3-m1-cA 636 33 0.1791 0.0189 0.3636 8.5 1k1y-a3-m1-cA_1k1y-a3-m1-cB
24 2x24-a1-m1-cB 667 25 0.1642 0.0165 0.4400 8.7 2x24-a1-m1-cA_2x24-a1-m1-cB
25 2x24-a1-m1-cA 654 25 0.1642 0.0168 0.4400 9.0 2x24-a1-m1-cA_2x24-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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