Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=96)
SMIKENVYFDGNVKSLGFSQQDGESTVGVMAPGQYTFGTGAPERMTVVKGALTIKRVTDA
DWVTFTAGEAFEVAGNSSFDLQVEVATAYLCEFLPA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eym-a1-m1-cA 96 96 1.0000 1.0000 1.0000 1.41e-67 7eym-a1-m1-cB_7eym-a1-m1-cA
2 7eym-a1-m1-cB 94 94 0.9792 1.0000 1.0000 3.10e-66 7eym-a1-m1-cB_7eym-a1-m1-cA
3 2oyz-a1-m2-cA 92 92 0.6458 0.6739 0.6739 4.85e-39 2oyz-a1-m1-cA_2oyz-a1-m2-cA
4 2oyz-a1-m1-cA 92 92 0.6458 0.6739 0.6739 4.85e-39 2oyz-a1-m1-cA_2oyz-a1-m2-cA
5 7eyl-a1-m1-cB 95 95 0.5208 0.5263 0.5263 8.26e-30 7eyl-a1-m1-cA_7eyl-a1-m1-cB
6 7eyl-a1-m1-cA 95 95 0.5208 0.5263 0.5263 8.26e-30 7eyl-a1-m1-cA_7eyl-a1-m1-cB
7 7eyp-a1-m1-cB 94 93 0.4896 0.5000 0.5054 3.88e-26 7eyp-a1-m1-cA_7eyp-a1-m1-cB
8 7eyp-a1-m1-cA 94 93 0.4896 0.5000 0.5054 3.88e-26 7eyp-a1-m1-cA_7eyp-a1-m1-cB
9 7eyk-a1-m2-cA 92 93 0.4479 0.4674 0.4624 2.79e-21 7eyk-a1-m1-cA_7eyk-a1-m2-cA
10 7eyk-a1-m1-cA 92 93 0.4479 0.4674 0.4624 2.79e-21 7eyk-a1-m1-cA_7eyk-a1-m2-cA
11 3hqx-a1-m2-cA 104 93 0.3333 0.3077 0.3441 1.06e-09 3hqx-a1-m1-cA_3hqx-a1-m2-cA
12 3hqx-a1-m1-cA 104 93 0.3333 0.3077 0.3441 1.06e-09 3hqx-a1-m1-cA_3hqx-a1-m2-cA
13 3eo6-a1-m1-cB 101 79 0.2083 0.1980 0.2532 0.13 3eo6-a1-m1-cA_3eo6-a1-m1-cB
14 3eo6-a1-m1-cA 101 79 0.2083 0.1980 0.2532 0.13 3eo6-a1-m1-cA_3eo6-a1-m1-cB
15 3ks7-a2-m1-cD 386 24 0.1042 0.0259 0.4167 0.78 3ks7-a2-m1-cC_3ks7-a2-m1-cD
16 3ks7-a2-m1-cC 384 24 0.1042 0.0260 0.4167 0.80 3ks7-a2-m1-cC_3ks7-a2-m1-cD
17 3waa-a1-m1-cG 104 31 0.1250 0.1154 0.3871 3.7 3waa-a1-m1-cG_3waa-a1-m1-cC
18 3waa-a1-m1-cC 107 31 0.1250 0.1121 0.3871 3.8 3waa-a1-m1-cG_3waa-a1-m1-cC
19 3quj-a1-m1-cA 295 25 0.1146 0.0373 0.4400 8.5 3quj-a1-m1-cA_3quj-a1-m1-cB
20 3quj-a1-m1-cB 298 25 0.1146 0.0369 0.4400 8.5 3quj-a1-m1-cA_3quj-a1-m1-cB
21 2pa4-a3-m1-cD 295 45 0.1667 0.0542 0.3556 9.2 2pa4-a3-m1-cA_2pa4-a3-m1-cD
22 2pa4-a1-m1-cD 295 45 0.1667 0.0542 0.3556 9.2 2pa4-a1-m1-cD_2pa4-a1-m1-cC
23 2pa4-a1-m1-cC 299 45 0.1667 0.0535 0.3556 9.4 2pa4-a1-m1-cD_2pa4-a1-m1-cC
24 2pa4-a3-m1-cA 294 45 0.1667 0.0544 0.3556 9.8 2pa4-a3-m1-cA_2pa4-a3-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600