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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
SMKFAVIDRKNFTLIHFEIEKPIKPEILKEIEIPSVDTRKGVVISGRGPIWLHCFLAHKY
AHTPFVAVYDPRLGAVVVQSHSELREGDVIDVVVEEIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6yud-a6-m1-cJ 98 98 1.0000 1.0000 1.0000 8.47e-68 6yud-a6-m1-cI_6yud-a6-m1-cJ
2 6yud-a6-m1-cI 98 98 1.0000 1.0000 1.0000 8.47e-68 6yud-a6-m1-cI_6yud-a6-m1-cJ
3 2qtq-a2-m1-cC 192 22 0.0918 0.0469 0.4091 1.5 2qtq-a2-m1-cC_2qtq-a2-m1-cD
4 2qtq-a2-m1-cD 193 22 0.0918 0.0466 0.4091 1.6 2qtq-a2-m1-cC_2qtq-a2-m1-cD
5 7n7a-a1-m1-cA 269 30 0.1224 0.0446 0.4000 2.0 7n7a-a1-m1-cA_7n7a-a1-m1-cB
6 7n7a-a1-m1-cB 270 30 0.1224 0.0444 0.4000 2.0 7n7a-a1-m1-cA_7n7a-a1-m1-cB
7 1j9a-a1-m2-cA 179 43 0.1531 0.0838 0.3488 4.5 1j9a-a1-m1-cA_1j9a-a1-m2-cA
8 1j9a-a1-m1-cA 179 43 0.1531 0.0838 0.3488 4.5 1j9a-a1-m1-cA_1j9a-a1-m2-cA
9 5ids-a2-m1-cD 289 41 0.1633 0.0554 0.3902 5.8 5ids-a2-m1-cC_5ids-a2-m1-cD
10 4kik-a1-m1-cA 618 35 0.1327 0.0210 0.3714 7.5 4kik-a1-m1-cA_4kik-a1-m1-cB
11 4e3c-a3-m1-cE 624 35 0.1327 0.0208 0.3714 7.5 4e3c-a3-m1-cD_4e3c-a3-m1-cE
12 4e3c-a3-m1-cD 624 35 0.1327 0.0208 0.3714 7.5 4e3c-a3-m1-cD_4e3c-a3-m1-cE
13 4kik-a1-m1-cB 648 35 0.1327 0.0201 0.3714 7.6 4kik-a1-m1-cA_4kik-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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