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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
SMKFNIIRNELHNIMNTQLKRAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQA
ADESERARKILENRALADEERMDALENQLKEARFLAEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bjg-a1-m2-cA 98 98 1.0000 1.0000 1.0000 2.33e-62 7bjg-a1-m1-cA_7bjg-a1-m2-cA
2 7bjg-a1-m1-cA 98 98 1.0000 1.0000 1.0000 2.33e-62 7bjg-a1-m1-cA_7bjg-a1-m2-cA
3 7bjn-a1-m1-cA 59 59 0.6020 1.0000 1.0000 3.04e-34 7bjn-a1-m1-cB_7bjn-a1-m1-cA
4 8iah-a1-m1-cX 241 78 0.5102 0.2075 0.6410 1.89e-24 8iah-a1-m1-cX_8iah-a1-m1-cW
5 8iah-a1-m1-cW 248 78 0.5102 0.2016 0.6410 2.11e-24 8iah-a1-m1-cX_8iah-a1-m1-cW
6 7bjn-a1-m1-cB 43 43 0.4388 1.0000 1.0000 9.64e-22 7bjn-a1-m1-cB_7bjn-a1-m1-cA
7 3u1c-a2-m3-cB 101 18 0.1531 0.1485 0.8333 0.013 3u1c-a2-m1-cB_3u1c-a2-m3-cB
8 3u1c-a2-m1-cB 101 18 0.1531 0.1485 0.8333 0.013 3u1c-a2-m1-cB_3u1c-a2-m3-cB
9 3u59-a2-m2-cC 101 18 0.1429 0.1386 0.7778 0.047 3u59-a2-m1-cC_3u59-a2-m2-cC
10 3u59-a2-m1-cC 101 18 0.1429 0.1386 0.7778 0.047 3u59-a2-m1-cC_3u59-a2-m2-cC
11 1e24-a1-m2-cA 485 75 0.2347 0.0474 0.3067 0.47 1e24-a1-m1-cA_1e24-a1-m2-cA
12 1e24-a1-m1-cA 485 75 0.2347 0.0474 0.3067 0.47 1e24-a1-m1-cA_1e24-a1-m2-cA
13 8glv-a1-m1-cGt 4520 67 0.1939 0.0042 0.2836 4.0 8glv-a1-m1-cDb_8glv-a1-m1-cGt
14 8glv-a1-m1-cGt 4520 77 0.2449 0.0053 0.3117 4.9 8glv-a1-m1-cDb_8glv-a1-m1-cGt
15 8glv-a1-m1-cDb 4520 67 0.1939 0.0042 0.2836 4.0 8glv-a1-m1-cDb_8glv-a1-m1-cGt
16 8glv-a1-m1-cDb 4520 77 0.2449 0.0053 0.3117 4.9 8glv-a1-m1-cDb_8glv-a1-m1-cGt
17 2wrc-a1-m1-cC 467 41 0.1327 0.0278 0.3171 6.9 2wrc-a1-m1-cC_2wrc-a1-m1-cA
18 7f6d-a1-m1-cF 521 53 0.2041 0.0384 0.3774 7.2 7f6d-a1-m1-cD_7f6d-a1-m1-cF
19 7f6d-a1-m1-cD 521 53 0.2041 0.0384 0.3774 7.2 7f6d-a1-m1-cD_7f6d-a1-m1-cF
20 2wrc-a1-m1-cA 474 41 0.1327 0.0274 0.3171 7.6 2wrc-a1-m1-cC_2wrc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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