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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
SMLYVSNLPVGTSSSAIHALFSAYGNVKDIWMLSNSAIVSYESLSSAIVARDALHNRPVF
ENHGPVQVMLAKPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6nx5-a2-m1-cC 74 74 1.0000 1.0000 1.0000 3.58e-49 6nx5-a2-m1-cC_6nx5-a2-m1-cD
2 6nx5-a2-m1-cD 75 75 0.9865 0.9733 0.9733 1.52e-46 6nx5-a2-m1-cC_6nx5-a2-m1-cD
3 6ff7-a1-m1-cz 101 59 0.2297 0.1683 0.2881 0.007 6ff7-a1-m1-cN_6ff7-a1-m1-cz
4 6ff7-a1-m1-cN 101 59 0.2297 0.1683 0.2881 0.007 6ff7-a1-m1-cN_6ff7-a1-m1-cz
5 5t9p-a6-m1-cD 91 64 0.1757 0.1429 0.2031 0.021 5t9p-a6-m1-cD_5t9p-a6-m1-cC
6 5t9p-a6-m1-cC 106 64 0.1757 0.1226 0.2031 0.023 5t9p-a6-m1-cD_5t9p-a6-m1-cC
7 3ctr-a2-m4-cA 75 34 0.1757 0.1733 0.3824 0.051 3ctr-a2-m1-cA_3ctr-a2-m4-cA, 3ctr-a2-m2-cA_3ctr-a2-m4-cA, 3ctr-a2-m3-cA_3ctr-a2-m4-cA
8 3ctr-a2-m3-cA 75 34 0.1757 0.1733 0.3824 0.051 3ctr-a2-m3-cA_3ctr-a2-m4-cA
9 3ctr-a2-m2-cA 75 34 0.1757 0.1733 0.3824 0.051 3ctr-a2-m2-cA_3ctr-a2-m4-cA
10 3ctr-a2-m1-cA 75 34 0.1757 0.1733 0.3824 0.051 3ctr-a2-m1-cA_3ctr-a2-m4-cA
11 5ifm-a1-m1-cA 254 61 0.2162 0.0630 0.2623 0.083 5ifm-a1-m1-cA_5ifm-a1-m1-cB
12 5ifm-a1-m1-cB 259 61 0.2162 0.0618 0.2623 0.083 5ifm-a1-m1-cA_5ifm-a1-m1-cB
13 3ulh-a1-m2-cA 82 26 0.1622 0.1463 0.4615 0.30 3ulh-a1-m1-cA_3ulh-a1-m2-cA
14 3ulh-a1-m1-cA 82 26 0.1622 0.1463 0.4615 0.30 3ulh-a1-m1-cA_3ulh-a1-m2-cA
15 5ca5-a1-m1-cB 248 63 0.2162 0.0645 0.2540 0.63 5ca5-a1-m1-cA_5ca5-a1-m1-cB
16 5ca5-a1-m1-cA 248 63 0.2162 0.0645 0.2540 0.63 5ca5-a1-m1-cA_5ca5-a1-m1-cB
17 7sp0-a1-m1-cB 244 59 0.2027 0.0615 0.2542 0.69 7sp0-a1-m1-cB_7sp0-a1-m1-cA
18 7sp0-a1-m1-cA 253 59 0.2027 0.0593 0.2542 0.69 7sp0-a1-m1-cB_7sp0-a1-m1-cA
19 5ifn-a1-m1-cB 252 72 0.2568 0.0754 0.2639 2.4 5ifn-a1-m1-cB_5ifn-a1-m1-cA
20 5ifn-a1-m1-cA 257 72 0.2568 0.0739 0.2639 2.4 5ifn-a1-m1-cB_5ifn-a1-m1-cA
21 2jwn-a1-m1-cB 124 33 0.1351 0.0806 0.3030 3.1 2jwn-a1-m1-cA_2jwn-a1-m1-cB
22 2jwn-a1-m1-cA 124 33 0.1351 0.0806 0.3030 3.1 2jwn-a1-m1-cA_2jwn-a1-m1-cB
23 4ft2-a1-m1-cB 670 27 0.1486 0.0164 0.4074 4.3 4ft2-a1-m1-cB_4ft2-a1-m1-cA
24 4ft2-a1-m1-cA 674 27 0.1486 0.0163 0.4074 4.3 4ft2-a1-m1-cB_4ft2-a1-m1-cA
25 1qap-a1-m1-cB 289 20 0.1486 0.0381 0.5500 7.4 1qap-a1-m1-cA_1qap-a1-m1-cB
26 1qap-a1-m1-cA 289 20 0.1486 0.0381 0.5500 7.4 1qap-a1-m1-cA_1qap-a1-m1-cB
27 3val-a1-m1-cI 172 21 0.1216 0.0523 0.4286 8.1 3val-a1-m1-cI_3val-a1-m1-cA
28 2g4b-a1-m2-cA 172 21 0.1216 0.0523 0.4286 8.1 2g4b-a1-m1-cA_2g4b-a1-m2-cA
29 2g4b-a1-m1-cA 172 21 0.1216 0.0523 0.4286 8.1 2g4b-a1-m1-cA_2g4b-a1-m2-cA
30 3val-a1-m1-cA 174 21 0.1216 0.0517 0.4286 8.3 3val-a1-m1-cI_3val-a1-m1-cA
31 3vai-a1-m1-cB 174 21 0.1216 0.0517 0.4286 8.3 3vai-a1-m1-cA_3vai-a1-m1-cB
32 3vai-a1-m1-cA 174 21 0.1216 0.0517 0.4286 8.3 3vai-a1-m1-cA_3vai-a1-m1-cB
33 6r5k-a1-m1-cD 390 61 0.2162 0.0410 0.2623 9.1 6r5k-a1-m1-cD_6r5k-a1-m1-cH
34 6r5k-a1-m1-cH 394 61 0.2162 0.0406 0.2623 9.1 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
35 3b4d-a1-m2-cA 80 34 0.1216 0.1125 0.2647 9.6 3b4d-a1-m1-cA_3b4d-a1-m2-cA
36 3b4d-a1-m1-cA 80 34 0.1216 0.1125 0.2647 9.6 3b4d-a1-m1-cA_3b4d-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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