Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=62)
SMMPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRK
SD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2x4k-a1-m3-cB 62 62 1.0000 1.0000 1.0000 8.31e-41 2x4k-a1-m2-cB_2x4k-a1-m3-cB, 2x4k-a1-m3-cA_2x4k-a1-m3-cB
2 2x4k-a1-m3-cA 62 62 1.0000 1.0000 1.0000 8.31e-41 2x4k-a1-m3-cA_2x4k-a1-m3-cB
3 2x4k-a1-m2-cB 62 62 1.0000 1.0000 1.0000 8.31e-41 2x4k-a1-m2-cB_2x4k-a1-m3-cB
4 2opa-a1-m3-cB 61 59 0.5806 0.5902 0.6102 2.12e-20 2opa-a1-m2-cB_2opa-a1-m3-cB, 2opa-a1-m3-cA_2opa-a1-m3-cB
5 2opa-a1-m3-cA 61 59 0.5806 0.5902 0.6102 2.12e-20 2opa-a1-m3-cA_2opa-a1-m3-cB
6 2opa-a1-m2-cB 61 59 0.5806 0.5902 0.6102 2.12e-20 2opa-a1-m2-cB_2opa-a1-m3-cB
7 7xuy-a1-m6-cA 64 59 0.3710 0.3594 0.3898 1.01e-10 7xuy-a1-m3-cA_7xuy-a1-m6-cA, 7xuy-a1-m5-cA_7xuy-a1-m6-cA
8 7xuy-a1-m5-cA 64 59 0.3710 0.3594 0.3898 1.01e-10 7xuy-a1-m5-cA_7xuy-a1-m6-cA
9 7xuy-a1-m3-cA 64 59 0.3710 0.3594 0.3898 1.01e-10 7xuy-a1-m3-cA_7xuy-a1-m6-cA
10 1otf-a1-m1-cF 59 54 0.3226 0.3390 0.3704 7.56e-10 1otf-a1-m1-cC_1otf-a1-m1-cF
11 1otf-a1-m1-cE 59 54 0.3226 0.3390 0.3704 7.56e-10 1otf-a1-m1-cC_1otf-a1-m1-cE
12 1otf-a1-m1-cC 59 54 0.3226 0.3390 0.3704 7.56e-10 1otf-a1-m1-cC_1otf-a1-m1-cE, 1otf-a1-m1-cC_1otf-a1-m1-cF
13 7puo-a2-m1-cF 126 54 0.3065 0.1508 0.3519 1.40e-09 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
14 7puo-a2-m1-cF 126 54 0.3065 0.1508 0.3519 7.91e-08 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
15 7puo-a2-m1-cE 129 54 0.3065 0.1473 0.3519 1.55e-09 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
16 7puo-a2-m1-cE 129 54 0.3065 0.1473 0.3519 8.39e-08 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
17 7puo-a2-m1-cD 129 54 0.3065 0.1473 0.3519 1.55e-09 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
18 7puo-a2-m1-cD 129 54 0.3065 0.1473 0.3519 8.39e-08 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
19 4fdx-a1-m3-cA 61 54 0.3387 0.3443 0.3889 1.02e-08 4fdx-a1-m3-cA_4fdx-a1-m3-cB
20 4fdx-a1-m3-cB 64 54 0.3387 0.3281 0.3889 1.04e-08 4fdx-a1-m2-cB_4fdx-a1-m3-cB, 4fdx-a1-m3-cA_4fdx-a1-m3-cB
21 4fdx-a1-m2-cB 64 54 0.3387 0.3281 0.3889 1.04e-08 4fdx-a1-m2-cB_4fdx-a1-m3-cB
22 3ry0-a1-m3-cB 63 54 0.3226 0.3175 0.3704 3.45e-08 3ry0-a1-m2-cB_3ry0-a1-m3-cB, 3ry0-a1-m3-cB_3ry0-a1-m3-cA
23 3ry0-a1-m2-cB 63 54 0.3226 0.3175 0.3704 3.45e-08 3ry0-a1-m2-cB_3ry0-a1-m3-cB
24 3ry0-a1-m3-cA 65 54 0.3226 0.3077 0.3704 3.49e-08 3ry0-a1-m3-cB_3ry0-a1-m3-cA
25 4faz-a1-m2-cC 62 55 0.2742 0.2742 0.3091 2.94e-07 4faz-a1-m1-cB_4faz-a1-m2-cC, 4faz-a1-m2-cB_4faz-a1-m2-cC
26 4faz-a1-m2-cB 62 55 0.2742 0.2742 0.3091 2.94e-07 4faz-a1-m2-cB_4faz-a1-m2-cC
27 4faz-a1-m1-cB 62 55 0.2742 0.2742 0.3091 2.94e-07 4faz-a1-m1-cB_4faz-a1-m2-cC
28 3m21-a1-m1-cC 63 57 0.3226 0.3175 0.3509 1.69e-06 3m21-a1-m1-cC_3m21-a1-m1-cD
29 3m21-a1-m1-cD 66 57 0.3226 0.3030 0.3509 1.82e-06 3m21-a1-m1-cC_3m21-a1-m1-cD
30 3m21-a1-m1-cB 66 57 0.3226 0.3030 0.3509 1.82e-06 3m21-a1-m1-cB_3m21-a1-m1-cF
31 3m21-a1-m1-cF 67 57 0.3226 0.2985 0.3509 1.92e-06 3m21-a1-m1-cB_3m21-a1-m1-cF
32 7m59-a1-m3-cB 64 54 0.2903 0.2812 0.3333 4.48e-05 7m59-a1-m2-cB_7m59-a1-m3-cB, 7m59-a1-m3-cA_7m59-a1-m3-cB
33 7m59-a1-m3-cA 64 54 0.2903 0.2812 0.3333 4.48e-05 7m59-a1-m3-cA_7m59-a1-m3-cB
34 7m59-a1-m2-cB 64 54 0.2903 0.2812 0.3333 4.48e-05 7m59-a1-m2-cB_7m59-a1-m3-cB
35 6vvn-a1-m1-cC 123 57 0.2419 0.1220 0.2632 4.63e-05 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
36 6vvn-a1-m1-cB 123 57 0.2419 0.1220 0.2632 4.63e-05 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
37 6vvn-a1-m1-cA 123 57 0.2419 0.1220 0.2632 4.63e-05 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
38 6blm-a1-m1-cC 127 55 0.2419 0.1181 0.2727 1.65e-04 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
39 6blm-a1-m1-cB 127 55 0.2419 0.1181 0.2727 1.65e-04 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
40 6blm-a1-m1-cA 127 55 0.2419 0.1181 0.2727 1.65e-04 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
41 5unq-a1-m1-cF 123 54 0.3065 0.1545 0.3519 1.77e-04 5unq-a1-m1-cA_5unq-a1-m1-cF
42 5unq-a1-m1-cF 123 50 0.2258 0.1138 0.2800 0.19 5unq-a1-m1-cA_5unq-a1-m1-cF
43 5unq-a1-m1-cA 123 54 0.3065 0.1545 0.3519 1.77e-04 5unq-a1-m1-cA_5unq-a1-m1-cF
44 5unq-a1-m1-cA 123 50 0.2258 0.1138 0.2800 0.19 5unq-a1-m1-cA_5unq-a1-m1-cF
45 1s0y-a2-m1-cG 62 44 0.2258 0.2258 0.3182 0.005 1s0y-a2-m1-cK_1s0y-a2-m1-cG
46 1s0y-a2-m1-cK 61 44 0.2258 0.2295 0.3182 0.005 1s0y-a2-m1-cK_1s0y-a2-m1-cG
47 3mb2-a1-m1-cE 61 60 0.2581 0.2623 0.2667 0.008 3mb2-a1-m1-cA_3mb2-a1-m1-cE
48 3mb2-a1-m1-cA 61 60 0.2581 0.2623 0.2667 0.008 3mb2-a1-m1-cA_3mb2-a1-m1-cE
49 6vvr-a1-m1-cC 123 54 0.2742 0.1382 0.3148 0.013 6vvr-a1-m1-cB_6vvr-a1-m1-cC
50 6vvr-a1-m1-cC 123 54 0.2258 0.1138 0.2593 0.035 6vvr-a1-m1-cB_6vvr-a1-m1-cC
51 6vvr-a1-m1-cB 123 54 0.2742 0.1382 0.3148 0.013 6vvr-a1-m1-cB_6vvr-a1-m1-cC
52 6vvr-a1-m1-cB 123 54 0.2258 0.1138 0.2593 0.035 6vvr-a1-m1-cB_6vvr-a1-m1-cC
53 5uif-a1-m1-cC 112 55 0.2419 0.1339 0.2727 0.039 5uif-a1-m1-cB_5uif-a1-m1-cC
54 5uif-a1-m1-cB 112 55 0.2419 0.1339 0.2727 0.039 5uif-a1-m1-cB_5uif-a1-m1-cC
55 6vvm-a1-m1-cC 123 57 0.1774 0.0894 0.1930 0.19 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
56 6vvm-a1-m1-cB 123 57 0.1774 0.0894 0.1930 0.19 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
57 6vvm-a1-m1-cA 123 57 0.1774 0.0894 0.1930 0.19 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
58 2aal-a2-m1-cE 129 48 0.1774 0.0853 0.2292 1.3 2aal-a2-m1-cD_2aal-a2-m1-cE
59 2aal-a2-m1-cD 129 48 0.1774 0.0853 0.2292 1.3 2aal-a2-m1-cD_2aal-a2-m1-cE
60 3pn2-a2-m2-cA 180 28 0.2097 0.0722 0.4643 3.4 3pn2-a2-m1-cA_3pn2-a2-m2-cA
61 3pn2-a2-m1-cA 180 28 0.2097 0.0722 0.4643 3.4 3pn2-a2-m1-cA_3pn2-a2-m2-cA
62 6kcx-a1-m2-cA 470 20 0.1774 0.0234 0.5500 4.7 6kcx-a1-m1-cA_6kcx-a1-m2-cA
63 6kcx-a1-m1-cA 470 20 0.1774 0.0234 0.5500 4.7 6kcx-a1-m1-cA_6kcx-a1-m2-cA
64 3t5s-a1-m3-cA 97 17 0.1613 0.1031 0.5882 7.0 3t5s-a1-m2-cA_3t5s-a1-m3-cA
65 3t5s-a1-m2-cA 97 17 0.1613 0.1031 0.5882 7.0 3t5s-a1-m2-cA_3t5s-a1-m3-cA
66 4wbd-a1-m2-cA 540 38 0.1774 0.0204 0.2895 8.4 4wbd-a1-m1-cA_4wbd-a1-m2-cA
67 4wbd-a1-m1-cA 540 38 0.1774 0.0204 0.2895 8.4 4wbd-a1-m1-cA_4wbd-a1-m2-cA
68 4pxn-a1-m2-cB 498 30 0.1613 0.0201 0.3333 9.6 4pxn-a1-m1-cA_4pxn-a1-m2-cB, 4pxn-a1-m1-cB_4pxn-a1-m2-cB, 4pxn-a1-m2-cA_4pxn-a1-m2-cB
69 4pxn-a1-m2-cA 498 30 0.1613 0.0201 0.3333 9.6 4pxn-a1-m2-cA_4pxn-a1-m2-cB
70 4pxn-a1-m1-cB 498 30 0.1613 0.0201 0.3333 9.6 4pxn-a1-m1-cB_4pxn-a1-m2-cB
71 4pxn-a1-m1-cA 498 30 0.1613 0.0201 0.3333 9.6 4pxn-a1-m1-cA_4pxn-a1-m2-cB
72 3g23-a1-m1-cB 264 14 0.1452 0.0341 0.6429 9.9 3g23-a1-m1-cA_3g23-a1-m1-cB
73 3g23-a1-m1-cA 264 14 0.1452 0.0341 0.6429 9.9 3g23-a1-m1-cA_3g23-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600