Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=95)
SMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVS
FRDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDY

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6n3f-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.05e-68 6n3f-a1-m1-cC_6n3f-a1-m1-cA
2 6n3f-a1-m1-cC 94 94 0.9895 1.0000 1.0000 5.84e-68 6n3f-a1-m1-cC_6n3f-a1-m1-cA
3 3dxb-a5-m1-cE 210 98 0.2947 0.1333 0.2857 1.41e-09 3dxb-a5-m1-cE_3dxb-a5-m1-cG
4 6lur-a1-m1-cD 213 98 0.2947 0.1315 0.2857 1.57e-09 6lur-a1-m1-cA_6lur-a1-m1-cD
5 6lur-a1-m1-cA 211 98 0.2947 0.1327 0.2857 1.62e-09 6lur-a1-m1-cA_6lur-a1-m1-cD
6 3dxb-a5-m1-cG 211 98 0.2947 0.1327 0.2857 1.62e-09 3dxb-a5-m1-cB_3dxb-a5-m1-cG, 3dxb-a5-m1-cE_3dxb-a5-m1-cG, 3dxb-a5-m1-cG_3dxb-a5-m1-cD
7 3dxb-a5-m1-cF 211 98 0.2947 0.1327 0.2857 1.62e-09 3dxb-a5-m1-cF_3dxb-a5-m1-cA, 3dxb-a5-m1-cF_3dxb-a5-m1-cD
8 3dxb-a5-m1-cC 211 98 0.2947 0.1327 0.2857 1.62e-09 3dxb-a5-m1-cB_3dxb-a5-m1-cC
9 3dxb-a5-m1-cB 211 98 0.2947 0.1327 0.2857 1.62e-09 3dxb-a5-m1-cB_3dxb-a5-m1-cC, 3dxb-a5-m1-cB_3dxb-a5-m1-cG
10 3dxb-a5-m1-cA 214 98 0.2947 0.1308 0.2857 1.77e-09 3dxb-a5-m1-cA_3dxb-a5-m1-cD, 3dxb-a5-m1-cF_3dxb-a5-m1-cA
11 3dxb-a5-m1-cD 216 98 0.2947 0.1296 0.2857 1.90e-09 3dxb-a5-m1-cA_3dxb-a5-m1-cD, 3dxb-a5-m1-cF_3dxb-a5-m1-cD, 3dxb-a5-m1-cG_3dxb-a5-m1-cD
12 2peh-a3-m2-cB 104 94 0.3053 0.2788 0.3085 7.10e-06 2peh-a3-m1-cA_2peh-a3-m2-cB
13 2peh-a3-m1-cA 104 94 0.3053 0.2788 0.3085 7.10e-06 2peh-a3-m1-cA_2peh-a3-m2-cB
14 4oz1-a1-m1-cA 111 77 0.2526 0.2162 0.3117 2.12e-05 4oz1-a1-m1-cB_4oz1-a1-m1-cA
15 4oz1-a1-m1-cB 110 77 0.2526 0.2182 0.3117 2.22e-05 4oz1-a1-m1-cB_4oz1-a1-m1-cA
16 3bs9-a3-m1-cB 79 30 0.1474 0.1772 0.4667 0.011 3bs9-a3-m1-cA_3bs9-a3-m1-cB
17 3bs9-a3-m1-cA 79 30 0.1474 0.1772 0.4667 0.011 3bs9-a3-m1-cA_3bs9-a3-m1-cB
18 3b4d-a1-m2-cA 80 58 0.1895 0.2250 0.3103 0.62 3b4d-a1-m1-cA_3b4d-a1-m2-cA
19 3b4d-a1-m1-cA 80 58 0.1895 0.2250 0.3103 0.62 3b4d-a1-m1-cA_3b4d-a1-m2-cA
20 7b5h-a1-m1-cFD 1109 52 0.1789 0.0153 0.3269 0.72 7b5h-a1-m1-cED_7b5h-a1-m1-cFD
21 7b5h-a1-m1-cED 1109 52 0.1789 0.0153 0.3269 0.72 7b5h-a1-m1-cED_7b5h-a1-m1-cFD
22 3v4m-a2-m1-cB 101 72 0.2421 0.2277 0.3194 0.96 3v4m-a2-m1-cB_3v4m-a2-m1-cA
23 3v4m-a1-m2-cB 101 72 0.2421 0.2277 0.3194 0.96 3v4m-a1-m2-cB_3v4m-a1-m1-cA
24 3v4m-a2-m1-cA 102 72 0.2421 0.2255 0.3194 1.1 3v4m-a2-m1-cB_3v4m-a2-m1-cA
25 3v4m-a1-m2-cA 102 72 0.2421 0.2255 0.3194 1.1 3v4m-a1-m1-cA_3v4m-a1-m2-cA
26 3v4m-a1-m1-cA 102 72 0.2421 0.2255 0.3194 1.1 3v4m-a1-m1-cA_3v4m-a1-m2-cA, 3v4m-a1-m2-cB_3v4m-a1-m1-cA
27 1dwk-a1-m1-cJ 152 52 0.1579 0.0987 0.2885 1.2 1dwk-a1-m1-cA_1dwk-a1-m1-cJ, 1dwk-a1-m1-cD_1dwk-a1-m1-cJ, 1dwk-a1-m1-cH_1dwk-a1-m1-cJ, 1dwk-a1-m1-cI_1dwk-a1-m1-cJ
28 1dwk-a1-m1-cI 152 52 0.1579 0.0987 0.2885 1.2 1dwk-a1-m1-cI_1dwk-a1-m1-cJ
29 1dwk-a1-m1-cH 152 52 0.1579 0.0987 0.2885 1.2 1dwk-a1-m1-cH_1dwk-a1-m1-cJ
30 1dwk-a1-m1-cD 152 52 0.1579 0.0987 0.2885 1.2 1dwk-a1-m1-cD_1dwk-a1-m1-cJ
31 1dwk-a1-m1-cA 152 52 0.1579 0.0987 0.2885 1.2 1dwk-a1-m1-cA_1dwk-a1-m1-cJ
32 1gd2-a3-m1-cI 40 33 0.1053 0.2500 0.3030 4.4 1gd2-a3-m1-cJ_1gd2-a3-m1-cI
33 3na2-a4-m1-cC 125 38 0.1368 0.1040 0.3421 5.0 3na2-a4-m1-cC_3na2-a4-m1-cD
34 3na2-a2-m3-cC 125 38 0.1368 0.1040 0.3421 5.0 3na2-a2-m3-cC_3na2-a2-m1-cD
35 4q6j-a1-m2-cB 239 41 0.1474 0.0586 0.3415 5.3 4q6j-a1-m1-cA_4q6j-a1-m2-cB, 4q6j-a1-m1-cB_4q6j-a1-m2-cB, 4q6j-a1-m2-cA_4q6j-a1-m2-cB
36 4q6j-a1-m1-cB 239 41 0.1474 0.0586 0.3415 5.3 4q6j-a1-m1-cB_4q6j-a1-m2-cB
37 4q6j-a1-m2-cA 238 41 0.1474 0.0588 0.3415 5.6 4q6j-a1-m2-cA_4q6j-a1-m2-cB
38 4q6j-a1-m1-cA 238 41 0.1474 0.0588 0.3415 5.6 4q6j-a1-m1-cA_4q6j-a1-m2-cB
39 5kw6-a1-m1-cA 201 66 0.2000 0.0945 0.2879 6.8 5kw6-a1-m1-cB_5kw6-a1-m1-cA
40 5kw6-a1-m1-cB 198 66 0.2000 0.0960 0.2879 7.4 5kw6-a1-m1-cB_5kw6-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600