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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
SMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLRE
HNPNKGNITLLTVTEKQFARMIYLHGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5zyf-a1-m1-cB 87 87 1.0000 1.0000 1.0000 3.61e-61 5zyf-a1-m1-cB_5zyf-a1-m1-cA
2 5zyf-a1-m1-cA 88 87 1.0000 0.9886 1.0000 4.63e-61 5zyf-a1-m1-cB_5zyf-a1-m1-cA
3 6qxt-a1-m1-cx 103 85 0.8621 0.7282 0.8824 3.45e-53 6qxt-a1-m1-cw_6qxt-a1-m1-cx
4 6qxt-a1-m1-cw 103 85 0.8621 0.7282 0.8824 3.45e-53 6qxt-a1-m1-cw_6qxt-a1-m1-cx
5 5xvo-a3-m1-cN 105 86 0.7586 0.6286 0.7674 5.44e-48 5xvo-a3-m1-cM_5xvo-a3-m1-cN
6 5xvo-a3-m1-cM 104 86 0.7586 0.6346 0.7674 5.46e-48 5xvo-a3-m1-cM_5xvo-a3-m1-cN
7 6jhz-a1-m1-cA 93 86 0.4598 0.4301 0.4651 3.66e-24 6jhz-a1-m1-cB_6jhz-a1-m1-cA
8 6jhz-a1-m1-cB 91 85 0.4483 0.4286 0.4588 1.79e-23 6jhz-a1-m1-cB_6jhz-a1-m1-cA
9 3moi-a1-m2-cA 381 36 0.1724 0.0394 0.4167 1.2 3moi-a1-m1-cA_3moi-a1-m2-cA
10 3moi-a1-m1-cA 381 36 0.1724 0.0394 0.4167 1.2 3moi-a1-m1-cA_3moi-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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