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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SMTSALTQGLERIPDQLGYLVLSEGAVLASSGDLENDEQAASAISELVSTACGFRLHRGM
NVPFKRLSVVFGEHTLLVTVSGQRVFVVKRQNR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vok-a6-m1-cF 93 93 1.0000 1.0000 1.0000 2.73e-64 5vok-a6-m3-cH_5vok-a6-m1-cF
2 5vok-a6-m3-cH 80 89 0.8602 1.0000 0.8989 4.49e-50 5vok-a6-m3-cH_5vok-a6-m1-cF
3 2o3i-a2-m2-cB 365 39 0.1505 0.0384 0.3590 0.59 2o3i-a2-m2-cB_2o3i-a2-m1-cA, 2o3i-a2-m2-cB_2o3i-a2-m2-cA
4 2o3i-a2-m2-cA 366 39 0.1505 0.0383 0.3590 0.60 2o3i-a2-m2-cB_2o3i-a2-m2-cA
5 2o3i-a2-m1-cA 366 39 0.1505 0.0383 0.3590 0.60 2o3i-a2-m2-cB_2o3i-a2-m1-cA
6 3qhq-a1-m2-cA 222 69 0.1935 0.0811 0.2609 4.3 3qhq-a1-m2-cB_3qhq-a1-m2-cA
7 3qhq-a1-m1-cA 222 69 0.1935 0.0811 0.2609 4.3 3qhq-a1-m2-cB_3qhq-a1-m1-cA
8 3qhq-a1-m2-cB 211 69 0.1935 0.0853 0.2609 4.6 3qhq-a1-m2-cB_3qhq-a1-m1-cA, 3qhq-a1-m2-cB_3qhq-a1-m2-cA
9 8ane-a1-m1-cE 316 61 0.2258 0.0665 0.3443 4.9 8ane-a1-m1-cC_8ane-a1-m1-cE
10 8ane-a1-m1-cC 316 61 0.2258 0.0665 0.3443 4.9 8ane-a1-m1-cB_8ane-a1-m1-cC, 8ane-a1-m1-cC_8ane-a1-m1-cE
11 8ane-a1-m1-cB 316 61 0.2258 0.0665 0.3443 4.9 8ane-a1-m1-cB_8ane-a1-m1-cC
12 3ngj-a1-m1-cD 222 66 0.1828 0.0766 0.2576 9.1 3ngj-a1-m1-cA_3ngj-a1-m1-cD
13 3ngj-a1-m1-cA 218 66 0.1828 0.0780 0.2576 9.4 3ngj-a1-m1-cA_3ngj-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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