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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
SNAADLFDGKRRDALIAERFGKVNINGTDCIVVESDFLAGKNVVVFSGNVIPRRGDRVVL
RGSEFTVTRIRRFNGKPQLTLEEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2pp6-a2-m2-cA 84 84 1.0000 1.0000 1.0000 1.05e-55 2pp6-a2-m1-cA_2pp6-a2-m2-cA
2 2pp6-a2-m1-cA 84 84 1.0000 1.0000 1.0000 1.05e-55 2pp6-a2-m1-cA_2pp6-a2-m2-cA
3 2pp6-a1-m4-cA 84 84 1.0000 1.0000 1.0000 1.05e-55 2pp6-a1-m2-cA_2pp6-a1-m4-cA
4 2pp6-a1-m2-cA 84 84 1.0000 1.0000 1.0000 1.05e-55 2pp6-a1-m2-cA_2pp6-a1-m4-cA
5 2pli-a1-m1-cA 83 43 0.1786 0.1807 0.3488 0.91 2pli-a1-m1-cB_2pli-a1-m1-cA
6 2pli-a1-m1-cB 81 43 0.1786 0.1852 0.3488 0.97 2pli-a1-m1-cB_2pli-a1-m1-cA, 2pli-a1-m1-cD_2pli-a1-m1-cB
7 2pli-a1-m1-cD 80 43 0.1786 0.1875 0.3488 0.98 2pli-a1-m1-cD_2pli-a1-m1-cB
8 3qze-a2-m1-cD 290 45 0.1905 0.0552 0.3556 2.1 3qze-a2-m1-cC_3qze-a2-m1-cD
9 3qze-a2-m1-cC 290 45 0.1905 0.0552 0.3556 2.1 3qze-a2-m1-cC_3qze-a2-m1-cD
10 2d4v-a2-m1-cD 427 27 0.1429 0.0281 0.4444 2.1 2d4v-a2-m1-cC_2d4v-a2-m1-cD
11 2d4v-a2-m1-cC 427 27 0.1429 0.0281 0.4444 2.1 2d4v-a2-m1-cC_2d4v-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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