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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
SNAANIKIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALL
DIPANGEIIRYGEVIGYAVRAIPRGSWIDESVVL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3laz-a2-m3-cB 94 94 1.0000 1.0000 1.0000 5.13e-65 3laz-a2-m1-cB_3laz-a2-m3-cB
2 3laz-a2-m1-cB 94 94 1.0000 1.0000 1.0000 5.13e-65 3laz-a2-m1-cB_3laz-a2-m3-cB
3 6u7l-a2-m1-cC 444 83 0.8830 0.1869 1.0000 2.77e-53 6u7l-a2-m1-cD_6u7l-a2-m1-cC
4 6u7l-a2-m1-cD 443 81 0.8617 0.1828 1.0000 1.57e-51 6u7l-a2-m1-cD_6u7l-a2-m1-cC
5 3k3s-a4-m1-cG 84 75 0.3085 0.3452 0.3867 9.36e-09 3k3s-a4-m1-cF_3k3s-a4-m1-cG
6 3k3s-a4-m1-cF 84 75 0.3085 0.3452 0.3867 9.36e-09 3k3s-a4-m1-cF_3k3s-a4-m1-cG
7 5sy4-a1-m1-cB 195 77 0.2340 0.1128 0.2857 1.3 5sy4-a1-m1-cA_5sy4-a1-m1-cB
8 5sy4-a1-m1-cA 195 77 0.2340 0.1128 0.2857 1.3 5sy4-a1-m1-cA_5sy4-a1-m1-cB
9 1vbh-a1-m2-cA 862 71 0.2128 0.0232 0.2817 4.5 1vbh-a1-m1-cA_1vbh-a1-m2-cA
10 1vbh-a1-m1-cA 862 71 0.2128 0.0232 0.2817 4.5 1vbh-a1-m1-cA_1vbh-a1-m2-cA
11 6l8q-a1-m3-cG 724 29 0.1170 0.0152 0.3793 4.5 6l8q-a1-m1-cC_6l8q-a1-m3-cG
12 6l8q-a1-m1-cC 724 29 0.1170 0.0152 0.3793 4.5 6l8q-a1-m1-cA_6l8q-a1-m1-cC, 6l8q-a1-m1-cC_6l8q-a1-m3-cG
13 6l8q-a1-m1-cA 724 29 0.1170 0.0152 0.3793 4.5 6l8q-a1-m1-cA_6l8q-a1-m1-cC
14 3uyk-a1-m1-cB 369 35 0.1277 0.0325 0.3429 5.1 3uyk-a1-m1-cB_3uyk-a1-m1-cA
15 3uyk-a1-m1-cA 373 35 0.1277 0.0322 0.3429 5.1 3uyk-a1-m1-cB_3uyk-a1-m1-cA
16 2pzk-a1-m1-cB 310 25 0.1277 0.0387 0.4800 6.1 2pzk-a1-m1-cA_2pzk-a1-m1-cB
17 2pzk-a1-m1-cA 310 25 0.1277 0.0387 0.4800 6.1 2pzk-a1-m1-cA_2pzk-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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