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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SNAERHQHLLSEYQQILTLSEQLVLATEGNWDALVDLETYLKAVESTANITISSCSSLLQ
DLLREKLRAILDNEIEIKRLLQLRLDRLSDLVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3nkz-a1-m1-cA 93 93 1.0000 1.0000 1.0000 7.66e-61 3nkz-a1-m1-cC_3nkz-a1-m1-cA, 3nkz-a1-m1-cD_3nkz-a1-m1-cA
2 3nkz-a3-m1-cD 92 92 0.9892 1.0000 1.0000 1.18e-59 3nkz-a3-m1-cC_3nkz-a3-m1-cD
3 3nkz-a1-m1-cD 92 92 0.9892 1.0000 1.0000 1.18e-59 3nkz-a1-m1-cD_3nkz-a1-m1-cA
4 3nkz-a3-m1-cC 91 91 0.9785 1.0000 1.0000 7.74e-59 3nkz-a3-m1-cC_3nkz-a3-m1-cD
5 3nkz-a1-m1-cC 91 91 0.9785 1.0000 1.0000 7.74e-59 3nkz-a1-m1-cC_3nkz-a1-m1-cA
6 3a7m-a1-m1-cA 112 88 0.3548 0.2946 0.3750 1.18e-08 3a7m-a1-m1-cA_3a7m-a1-m1-cB
7 3a7m-a1-m1-cB 114 88 0.3548 0.2895 0.3750 1.38e-08 3a7m-a1-m1-cA_3a7m-a1-m1-cB
8 7r6u-a1-m1-cA 72 25 0.0860 0.1111 0.3200 1.2 7r6u-a1-m1-cA_7r6u-a1-m1-cB
9 7r6u-a1-m1-cB 74 25 0.0860 0.1081 0.3200 1.2 7r6u-a1-m1-cA_7r6u-a1-m1-cB
10 3h3m-a1-m1-cB 80 81 0.2688 0.3125 0.3086 1.7 3h3m-a1-m1-cB_3h3m-a1-m1-cA
11 3h3m-a1-m1-cA 87 84 0.2796 0.2989 0.3095 2.0 3h3m-a1-m1-cB_3h3m-a1-m1-cA
12 1vdw-a1-m1-cA 248 42 0.1290 0.0484 0.2857 2.6 1vdw-a1-m1-cA_1vdw-a1-m1-cB
13 1vdw-a1-m1-cB 248 42 0.1290 0.0484 0.2857 2.7 1vdw-a1-m1-cA_1vdw-a1-m1-cB
14 2gjx-a6-m1-cH 492 51 0.1720 0.0325 0.3137 5.7 2gjx-a6-m1-cE_2gjx-a6-m1-cH
15 2gjx-a6-m1-cE 492 51 0.1720 0.0325 0.3137 5.7 2gjx-a6-m1-cE_2gjx-a6-m1-cH

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Reference:
Jacob Schwartz et al.

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