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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SNAKELIQNIIEESYTDSQFTLSVLSEKLDLSSGYLSIFKKNFGIPFQDYLLQKREKAKL
LLLTTELKNYEIAEQVGFEDVNYFITKFKKYYQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lsg-a2-m1-cD 93 93 1.0000 1.0000 1.0000 1.13e-61 3lsg-a2-m1-cD_3lsg-a2-m1-cC
2 3lsg-a2-m1-cC 100 92 0.9892 0.9200 1.0000 4.66e-61 3lsg-a2-m1-cD_3lsg-a2-m1-cC
3 4fe4-a1-m1-cC 380 40 0.1828 0.0447 0.4250 0.001 4fe4-a1-m1-cA_4fe4-a1-m1-cC
4 4fe4-a1-m1-cA 380 40 0.1828 0.0447 0.4250 0.001 4fe4-a1-m1-cA_4fe4-a1-m1-cC
5 6xiv-a1-m2-cB 245 94 0.3011 0.1143 0.2979 0.032 6xiv-a1-m2-cB_6xiv-a1-m1-cA
6 6xiv-a1-m1-cA 246 94 0.3011 0.1138 0.2979 0.036 6xiv-a1-m2-cB_6xiv-a1-m1-cA
7 5woq-a2-m1-cC 83 39 0.1290 0.1446 0.3077 1.7 5woq-a2-m1-cC_5woq-a2-m1-cB
8 5woq-a2-m1-cB 85 39 0.1290 0.1412 0.3077 1.7 5woq-a2-m1-cC_5woq-a2-m1-cB
9 2w9x-a1-m1-cB 329 27 0.1183 0.0334 0.4074 3.7 2w9x-a1-m1-cA_2w9x-a1-m1-cB
10 2w9x-a1-m1-cA 312 33 0.1290 0.0385 0.3636 3.8 2w9x-a1-m1-cA_2w9x-a1-m1-cB
11 3wmw-a1-m1-cA 277 50 0.2043 0.0686 0.3800 4.7 3wmw-a1-m1-cA_3wmw-a1-m1-cB
12 6z1h-a1-m1-cA 382 55 0.1720 0.0419 0.2909 4.8 6z1h-a1-m1-cB_6z1h-a1-m1-cA
13 3wmw-a1-m1-cB 278 50 0.2043 0.0683 0.3800 4.9 3wmw-a1-m1-cA_3wmw-a1-m1-cB
14 6z1h-a1-m1-cB 373 55 0.1720 0.0429 0.2909 5.9 6z1h-a1-m1-cB_6z1h-a1-m1-cA
15 5xgz-a1-m3-cB 445 17 0.1075 0.0225 0.5882 8.4 5xgz-a1-m3-cA_5xgz-a1-m3-cB
16 5xgz-a1-m3-cA 445 17 0.1075 0.0225 0.5882 8.4 5xgz-a1-m3-cA_5xgz-a1-m3-cB

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Reference:
Jacob Schwartz et al.

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