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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
SNAKYFQIDELTLNALRITTIESLTPEQRLELIKAHLLNIKTPSDDNEPWDE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kko-a1-m3-cB 52 52 1.0000 1.0000 1.0000 1.40e-32 5kko-a1-m1-cA_5kko-a1-m3-cB, 5kko-a1-m3-cB_5kko-a1-m3-cC
2 5kko-a1-m3-cC 53 52 1.0000 0.9811 1.0000 1.43e-32 5kko-a1-m2-cE_5kko-a1-m3-cC, 5kko-a1-m3-cB_5kko-a1-m3-cC
3 5kko-a1-m2-cE 52 51 0.9808 0.9808 1.0000 6.59e-32 5kko-a1-m1-cA_5kko-a1-m2-cE, 5kko-a1-m2-cE_5kko-a1-m3-cC
4 5kko-a1-m1-cA 51 50 0.9615 0.9804 1.0000 4.50e-31 5kko-a1-m1-cA_5kko-a1-m2-cE, 5kko-a1-m1-cA_5kko-a1-m3-cB
5 3kvo-a3-m1-cA 273 71 0.4038 0.0769 0.2958 3.7 3kvo-a3-m1-cA_3kvo-a3-m1-cB
6 3kvo-a3-m1-cB 276 71 0.4038 0.0761 0.2958 4.0 3kvo-a3-m1-cA_3kvo-a3-m1-cB
7 5xux-a3-m1-cF 238 41 0.2500 0.0546 0.3171 7.4 5xux-a3-m1-cE_5xux-a3-m1-cF
8 5xux-a3-m1-cE 223 41 0.2500 0.0583 0.3171 9.9 5xux-a3-m1-cE_5xux-a3-m1-cF
9 5mto-a1-m1-cB 107 22 0.1731 0.0841 0.4091 10.0 5mto-a1-m1-cA_5mto-a1-m1-cB
10 5mto-a1-m1-cA 107 22 0.1731 0.0841 0.4091 10.0 5mto-a1-m1-cA_5mto-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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