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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
SNAKYFQIDELTLNALRITTIESLTPEQRLELIKAHLLNIKTPSDDNEPWDEF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kko-a1-m3-cC 53 53 1.0000 1.0000 1.0000 1.52e-33 5kko-a1-m2-cE_5kko-a1-m3-cC, 5kko-a1-m3-cB_5kko-a1-m3-cC
2 5kko-a1-m2-cE 52 52 0.9811 1.0000 1.0000 7.73e-33 5kko-a1-m1-cA_5kko-a1-m2-cE, 5kko-a1-m2-cE_5kko-a1-m3-cC
3 5kko-a1-m3-cB 52 52 0.9811 1.0000 1.0000 1.46e-32 5kko-a1-m1-cA_5kko-a1-m3-cB, 5kko-a1-m3-cB_5kko-a1-m3-cC
4 5kko-a1-m1-cA 51 51 0.9623 1.0000 1.0000 4.68e-32 5kko-a1-m1-cA_5kko-a1-m2-cE, 5kko-a1-m1-cA_5kko-a1-m3-cB
5 3kvo-a3-m1-cA 273 71 0.3962 0.0769 0.2958 3.5 3kvo-a3-m1-cA_3kvo-a3-m1-cB
6 3kvo-a3-m1-cB 276 71 0.3962 0.0761 0.2958 3.6 3kvo-a3-m1-cA_3kvo-a3-m1-cB
7 5xux-a3-m1-cF 238 41 0.2453 0.0546 0.3171 6.4 5xux-a3-m1-cE_5xux-a3-m1-cF
8 3lkv-a1-m2-cA 294 26 0.2264 0.0408 0.4615 8.5 3lkv-a1-m1-cA_3lkv-a1-m2-cA
9 3lkv-a1-m1-cA 294 26 0.2264 0.0408 0.4615 8.5 3lkv-a1-m1-cA_3lkv-a1-m2-cA
10 5xux-a3-m1-cE 223 41 0.2453 0.0583 0.3171 8.5 5xux-a3-m1-cE_5xux-a3-m1-cF
11 2z5f-a1-m1-cB 293 28 0.2075 0.0375 0.3929 9.7 2z5f-a1-m1-cA_2z5f-a1-m1-cB
12 2z5f-a1-m1-cA 293 28 0.2075 0.0375 0.3929 9.7 2z5f-a1-m1-cA_2z5f-a1-m1-cB
13 5fmn-a1-m2-cA 86 25 0.1698 0.1047 0.3600 10.0 5fmn-a1-m2-cA_5fmn-a1-m2-cB
14 5fmn-a1-m1-cA 86 25 0.1698 0.1047 0.3600 10.0 5fmn-a1-m1-cA_5fmn-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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