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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SNATAYIIVGLTPKDAEKLQQYGARVASTLAKYSGEVLVKGSVEQLHGKFEHKAQVILEF
PSREDAYNWYHSEEYQALISTRDLGDSQFQLIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lo3-a1-m1-cB 93 93 1.0000 1.0000 1.0000 1.72e-65 3lo3-a1-m1-cA_3lo3-a1-m1-cB
2 3lo3-a1-m1-cA 93 93 1.0000 1.0000 1.0000 1.72e-65 3lo3-a1-m1-cA_3lo3-a1-m1-cB
3 2fiu-a1-m1-cB 93 81 0.2688 0.2688 0.3086 1.69e-06 2fiu-a1-m1-cA_2fiu-a1-m1-cB
4 2fiu-a1-m1-cA 93 81 0.2688 0.2688 0.3086 1.69e-06 2fiu-a1-m1-cA_2fiu-a1-m1-cB
5 3h7l-a3-m1-cC 575 70 0.2043 0.0330 0.2714 0.25 3h7l-a3-m1-cB_3h7l-a3-m1-cC
6 3h7l-a3-m1-cB 575 70 0.2043 0.0330 0.2714 0.25 3h7l-a3-m1-cB_3h7l-a3-m1-cC
7 3h7l-a2-m3-cC 575 70 0.2043 0.0330 0.2714 0.25 3h7l-a2-m1-cB_3h7l-a2-m3-cC
8 3h7l-a2-m1-cB 575 70 0.2043 0.0330 0.2714 0.25 3h7l-a2-m1-cB_3h7l-a2-m3-cC
9 3uwd-a2-m2-cA 380 77 0.2366 0.0579 0.2857 8.9 3uwd-a2-m1-cA_3uwd-a2-m2-cA
10 3uwd-a2-m1-cA 380 77 0.2366 0.0579 0.2857 8.9 3uwd-a2-m1-cA_3uwd-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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