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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
SNNDLLNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAEGPKDLATLAADTGSVPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x1b-a2-m2-cA 337 57 1.0000 0.1691 1.0000 3.55e-35 1x1b-a2-m1-cA_1x1b-a2-m2-cA
2 1x1b-a2-m1-cA 337 57 1.0000 0.1691 1.0000 3.55e-35 1x1b-a2-m1-cA_1x1b-a2-m2-cA
3 4z2y-a1-m2-cA 299 48 0.2456 0.0468 0.2917 0.076 4z2y-a1-m1-cA_4z2y-a1-m2-cA
4 4z2y-a1-m1-cA 299 48 0.2456 0.0468 0.2917 0.076 4z2y-a1-m1-cA_4z2y-a1-m2-cA
5 6clx-a1-m1-cA 332 31 0.2105 0.0361 0.3871 0.28 6clx-a1-m1-cA_6clx-a1-m1-cB
6 6clx-a1-m1-cB 334 31 0.2105 0.0359 0.3871 0.29 6clx-a1-m1-cA_6clx-a1-m1-cB
7 7ux7-a1-m1-cB 360 31 0.2456 0.0389 0.4516 0.51 7ux7-a1-m1-cB_7ux7-a1-m1-cA
8 7ux7-a1-m1-cA 378 31 0.2456 0.0370 0.4516 0.53 7ux7-a1-m1-cB_7ux7-a1-m1-cA
9 4d7k-a2-m1-cC 335 31 0.2456 0.0418 0.4516 0.75 4d7k-a2-m1-cC_4d7k-a2-m1-cD
10 4d7k-a2-m1-cD 336 31 0.2456 0.0417 0.4516 0.75 4d7k-a2-m1-cC_4d7k-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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